FFCP PHASE1:Hg19::chr3:128720140..128720152,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79825 | |EntrezGene=79825 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25692 | |HGNC=25692 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HA90 | |UniProt=Q9HA90 | ||
|association_with_transcript=-319bp_to_ENST00000436022,ENST00000480450,NM_024768,uc011bkt.1_5end | |association_with_transcript=-319bp_to_ENST00000436022,ENST00000480450,NM_024768,uc011bkt.1_5end | ||
|cluster_id=chr3:128720140..128720152,+ | |||
|description=CAGE_peak_3_at_CCDC48_5end | |description=CAGE_peak_3_at_CCDC48_5end | ||
|id=chr3:128720140..128720152,+ | |id=chr3:128720140..128720152,+ | ||
|ontology_enrichment_celltype=CL:0000115!8.76e-07!35 | |ontology_enrichment_celltype=CL:0000115!8.76e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0002138;9.13e-11;6 | |ontology_enrichment_celltype_v019=CL:0002138;9.13e-11;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.34e-10,6;CL:0002138,1.34e-10,6;CL:0005022,1.34e-10,6 | |||
|ontology_enrichment_development_v019=CL:0005022;9.13e-11;6!UBERON:0006242;1.65e-08;1!UBERON:0001045;5.39e-08;1 | |ontology_enrichment_development_v019=CL:0005022;9.13e-11;6!UBERON:0006242;1.65e-08;1!UBERON:0001045;5.39e-08;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.52e-42!115;UBERON:0001049!1.61e-18!57;UBERON:0005068!1.61e-18!57;UBERON:0006241!1.61e-18!57;UBERON:0007135!1.61e-18!57;UBERON:0002616!5.63e-14!59;UBERON:0003075!1.54e-13!86;UBERON:0007284!1.54e-13!86;UBERON:0004111!6.39e-13!241;UBERON:0003076!1.21e-12!15;UBERON:0003057!1.21e-12!15;UBERON:0002346!1.82e-12!90;UBERON:0000477!4.08e-12!286;UBERON:0000955!4.22e-12!69;UBERON:0006238!4.22e-12!69;UBERON:0001017!5.14e-12!82;UBERON:0005743!7.04e-12!86;UBERON:0000073!7.59e-10!94;UBERON:0001016!7.59e-10!94;UBERON:0004733!1.08e-09!12;UBERON:0002028!1.08e-09!12;UBERON:0007277!1.08e-09!12;UBERON:0000153!1.39e-09!129;UBERON:0007811!1.39e-09!129;UBERON:0005409!1.50e-09!35;UBERON:0002680!2.82e-09!9;UBERON:0001895!2.82e-09!9;UBERON:0010092!2.82e-09!9;UBERON:0003080!3.12e-09!42;UBERON:0004732!9.04e-09!13;UBERON:0000025!1.26e-08!194;UBERON:0002780!1.91e-08!41;UBERON:0001890!1.91e-08!41;UBERON:0006240!1.91e-08!41;UBERON:0000468!2.44e-08!659;UBERON:0000059!2.91e-08!11;UBERON:0001155!5.23e-08!9;UBERON:0000033!7.13e-08!123;UBERON:0000160!8.25e-08!27;UBERON:0000467!1.93e-07!625;UBERON:0000481!2.20e-07!347;UBERON:0000480!2.23e-07!626;UBERON:0002298!3.06e-07!8;UBERON:0000062!4.32e-07!511;UBERON:0000483!8.23e-07!309;UBERON:0002020!8.71e-07!34;UBERON:0003528!8.71e-07!34 | |ontology_enrichment_uberon=UBERON:0007023!1.52e-42!115;UBERON:0001049!1.61e-18!57;UBERON:0005068!1.61e-18!57;UBERON:0006241!1.61e-18!57;UBERON:0007135!1.61e-18!57;UBERON:0002616!5.63e-14!59;UBERON:0003075!1.54e-13!86;UBERON:0007284!1.54e-13!86;UBERON:0004111!6.39e-13!241;UBERON:0003076!1.21e-12!15;UBERON:0003057!1.21e-12!15;UBERON:0002346!1.82e-12!90;UBERON:0000477!4.08e-12!286;UBERON:0000955!4.22e-12!69;UBERON:0006238!4.22e-12!69;UBERON:0001017!5.14e-12!82;UBERON:0005743!7.04e-12!86;UBERON:0000073!7.59e-10!94;UBERON:0001016!7.59e-10!94;UBERON:0004733!1.08e-09!12;UBERON:0002028!1.08e-09!12;UBERON:0007277!1.08e-09!12;UBERON:0000153!1.39e-09!129;UBERON:0007811!1.39e-09!129;UBERON:0005409!1.50e-09!35;UBERON:0002680!2.82e-09!9;UBERON:0001895!2.82e-09!9;UBERON:0010092!2.82e-09!9;UBERON:0003080!3.12e-09!42;UBERON:0004732!9.04e-09!13;UBERON:0000025!1.26e-08!194;UBERON:0002780!1.91e-08!41;UBERON:0001890!1.91e-08!41;UBERON:0006240!1.91e-08!41;UBERON:0000468!2.44e-08!659;UBERON:0000059!2.91e-08!11;UBERON:0001155!5.23e-08!9;UBERON:0000033!7.13e-08!123;UBERON:0000160!8.25e-08!27;UBERON:0000467!1.93e-07!625;UBERON:0000481!2.20e-07!347;UBERON:0000480!2.23e-07!626;UBERON:0002298!3.06e-07!8;UBERON:0000062!4.32e-07!511;UBERON:0000483!8.23e-07!309;UBERON:0002020!8.71e-07!34;UBERON:0003528!8.71e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;2.68e-14;2!UBERON:0005409;2.42e-13;22!UBERON:0000160;8.28e-13;17!UBERON:0001155;4.89e-12;9!UBERON:0000059;7.09e-10;11!UBERON:0002171;1.97e-08;1!UBERON:0006518;1.97e-08;1!UBERON:0008949;1.97e-08;1!UBERON:0000101;1.97e-08;1!UBERON:0002167;1.97e-08;1!UBERON:0001473;3.43e-08;8!UBERON:0004536;3.43e-08;8!UBERON:0006558;3.43e-08;8!UBERON:0004921;4.47e-08;33!UBERON:0005795;5.39e-08;1!UBERON:0006834;5.39e-08;1!UBERON:0001154;5.39e-08;1!UBERON:0000996;5.39e-08;1!UBERON:0002146;5.39e-08;1!UBERON:0001153;5.39e-08;1!UBERON:0009854;5.39e-08;1!UBERON:0005623;5.39e-08;1!UBERON:0000922;7.68e-08;49!UBERON:0003296;1.39e-07;4!UBERON:0010133;1.39e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0000007;2.68e-14;2!UBERON:0005409;2.42e-13;22!UBERON:0000160;8.28e-13;17!UBERON:0001155;4.89e-12;9!UBERON:0000059;7.09e-10;11!UBERON:0002171;1.97e-08;1!UBERON:0006518;1.97e-08;1!UBERON:0008949;1.97e-08;1!UBERON:0000101;1.97e-08;1!UBERON:0002167;1.97e-08;1!UBERON:0001473;3.43e-08;8!UBERON:0004536;3.43e-08;8!UBERON:0006558;3.43e-08;8!UBERON:0004921;4.47e-08;33!UBERON:0005795;5.39e-08;1!UBERON:0006834;5.39e-08;1!UBERON:0001154;5.39e-08;1!UBERON:0000996;5.39e-08;1!UBERON:0002146;5.39e-08;1!UBERON:0001153;5.39e-08;1!UBERON:0009854;5.39e-08;1!UBERON:0005623;5.39e-08;1!UBERON:0000922;7.68e-08;49!UBERON:0003296;1.39e-07;4!UBERON:0010133;1.39e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.05e-15,25;UBERON:0000007,4.62e-14,2;UBERON:0000160,8.15e-13,17;UBERON:0001155,7.36e-12,9;UBERON:0000059,9.88e-10,11;UBERON:0002171,2.19e-08,1;UBERON:0006518,2.19e-08,1;UBERON:0008949,2.19e-08,1;UBERON:0000101,2.19e-08,1;UBERON:0002167,2.19e-08,1;UBERON:0000996,2.35e-08,1;UBERON:0002146,2.71e-08,1;UBERON:0005623,2.71e-08,1;UBERON:0001473,4.56e-08,8;UBERON:0004536,4.56e-08,8;UBERON:0006558,4.56e-08,8;UBERON:0001154,4.71e-08,1;UBERON:0001153,4.71e-08,1;UBERON:0001045,4.71e-08,1;UBERON:0006834,6.19e-08,1;UBERON:0003296,1.81e-07,4;UBERON:0010133,1.81e-07,4;UBERON:0001007,2.01e-07,145;UBERON:0001555,2.01e-07,145;UBERON:0007026,2.01e-07,145;UBERON:0004921,4.32e-07,118 | |||
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| ||
|short_description=p3@CCDC48 | |short_description=p3@CCDC48 | ||
}} | }} |
Latest revision as of 08:00, 20 September 2015
Short description: | p3@CCDC48 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CCDC48_5end |
Coexpression cluster: | NA |
Association with transcript: | -319bp_to_ENST00000436022, ENST00000480450, NM_024768, uc011bkt.1_5end |
EntrezGene: | CCDC48 |
HGNC: | 25692 |
UniProt: | Q9HA90 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.34e-10 | 6 |
endothelial cell of lymphatic vessel | 1.34e-10 | 6 |
vascular lymphangioblast | 1.34e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 3.05e-15 | 25 |
pituitary gland | 4.62e-14 | 2 |
intestine | 8.15e-13 | 17 |
colon | 7.36e-12 | 9 |
large intestine | 9.88e-10 | 11 |
lower lobe of right lung | 2.19e-08 | 1 |
right lung lobe | 2.19e-08 | 1 |
lower lobe of lung | 2.19e-08 | 1 |
lobe of lung | 2.19e-08 | 1 |
right lung | 2.19e-08 | 1 |
vagina | 2.35e-08 | 1 |
pulmonary valve | 2.71e-08 | 1 |
semi-lunar valve | 2.71e-08 | 1 |
lymphatic vessel | 4.56e-08 | 8 |
lymph vasculature | 4.56e-08 | 8 |
lymphatic part of lymphoid system | 4.56e-08 | 8 |
vermiform appendix | 4.71e-08 | 1 |
caecum | 4.71e-08 | 1 |
midgut | 4.71e-08 | 1 |
uterus or analog | 6.19e-08 | 1 |
gland of diencephalon | 1.81e-07 | 4 |
neuroendocrine gland | 1.81e-07 | 4 |
digestive system | 2.01e-07 | 145 |
digestive tract | 2.01e-07 | 145 |
primitive gut | 2.01e-07 | 145 |
subdivision of digestive tract | 4.32e-07 | 118 |