FFCP PHASE1:Hg19::chr11:7695243..7695268,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51700 | |EntrezGene=51700 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24376 | |HGNC=24376 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=170bp_to_ENST00000533558_5end | |association_with_transcript=170bp_to_ENST00000533558_5end | ||
|cluster_id=chr11:7695243..7695268,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_12_at_CYB5R2_5end | |description=CAGE_peak_12_at_CYB5R2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | |ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!8.95e-40!57;UBERON:0005068!8.95e-40!57;UBERON:0006241!8.95e-40!57;UBERON:0007135!8.95e-40!57;UBERON:0002616!9.38e-31!59;UBERON:0002780!2.68e-28!41;UBERON:0001890!2.68e-28!41;UBERON:0006240!2.68e-28!41;UBERON:0003075!6.84e-28!86;UBERON:0007284!6.84e-28!86;UBERON:0005743!1.24e-27!86;UBERON:0001017!1.42e-27!82;UBERON:0003080!1.82e-27!42;UBERON:0001893!1.03e-26!34;UBERON:0002020!1.76e-26!34;UBERON:0003528!1.76e-26!34;UBERON:0000955!2.04e-26!69;UBERON:0006238!2.04e-26!69;UBERON:0002346!3.49e-26!90;UBERON:0002791!3.61e-25!33;UBERON:0000073!4.69e-24!94;UBERON:0001016!4.69e-24!94;UBERON:0001869!3.01e-23!32;UBERON:0003056!4.60e-20!61;UBERON:0002308!3.32e-19!9;UBERON:0000125!3.32e-19!9;UBERON:0007023!2.10e-17!115;UBERON:0000025!2.08e-16!194;UBERON:0009663!1.66e-15!7;UBERON:0000033!6.89e-14!123;UBERON:0000153!8.17e-14!129;UBERON:0007811!8.17e-14!129;UBERON:0003076!2.53e-13!15;UBERON:0003057!2.53e-13!15;UBERON:0002298!9.17e-13!8;UBERON:0000956!1.97e-12!25;UBERON:0000203!1.97e-12!25;UBERON:0002420!8.46e-12!9;UBERON:0007245!8.46e-12!9;UBERON:0010009!8.46e-12!9;UBERON:0010011!8.46e-12!9;UBERON:0000454!8.46e-12!9;UBERON:0004121!2.64e-11!169;UBERON:0000924!8.16e-11!173;UBERON:0006601!8.16e-11!173;UBERON:0004111!9.50e-11!241;UBERON:0002619!4.14e-10!22;UBERON:0000369!1.26e-09!4;UBERON:0002435!1.26e-09!4;UBERON:0000204!1.26e-09!4;UBERON:0010082!1.26e-09!4;UBERON:0000483!2.02e-09!309;UBERON:0001950!2.10e-09!20;UBERON:0000119!3.34e-09!312;UBERON:0000200!6.27e-09!6;UBERON:0000477!3.16e-08!286;UBERON:0002240!3.56e-08!3;UBERON:0004733!4.32e-08!12;UBERON:0002028!4.32e-08!12;UBERON:0007277!4.32e-08!12;UBERON:0001896!1.58e-07!3;UBERON:0005290!1.58e-07!3;UBERON:0010096!1.58e-07!3;UBERON:0005383!1.80e-07!3;UBERON:0005382!1.80e-07!3;UBERON:0004732!2.18e-07!13;UBERON:0002771!2.47e-07!3;UBERON:0006331!3.85e-07!3;UBERON:0000988!4.11e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!8.95e-40!57;UBERON:0005068!8.95e-40!57;UBERON:0006241!8.95e-40!57;UBERON:0007135!8.95e-40!57;UBERON:0002616!9.38e-31!59;UBERON:0002780!2.68e-28!41;UBERON:0001890!2.68e-28!41;UBERON:0006240!2.68e-28!41;UBERON:0003075!6.84e-28!86;UBERON:0007284!6.84e-28!86;UBERON:0005743!1.24e-27!86;UBERON:0001017!1.42e-27!82;UBERON:0003080!1.82e-27!42;UBERON:0001893!1.03e-26!34;UBERON:0002020!1.76e-26!34;UBERON:0003528!1.76e-26!34;UBERON:0000955!2.04e-26!69;UBERON:0006238!2.04e-26!69;UBERON:0002346!3.49e-26!90;UBERON:0002791!3.61e-25!33;UBERON:0000073!4.69e-24!94;UBERON:0001016!4.69e-24!94;UBERON:0001869!3.01e-23!32;UBERON:0003056!4.60e-20!61;UBERON:0002308!3.32e-19!9;UBERON:0000125!3.32e-19!9;UBERON:0007023!2.10e-17!115;UBERON:0000025!2.08e-16!194;UBERON:0009663!1.66e-15!7;UBERON:0000033!6.89e-14!123;UBERON:0000153!8.17e-14!129;UBERON:0007811!8.17e-14!129;UBERON:0003076!2.53e-13!15;UBERON:0003057!2.53e-13!15;UBERON:0002298!9.17e-13!8;UBERON:0000956!1.97e-12!25;UBERON:0000203!1.97e-12!25;UBERON:0002420!8.46e-12!9;UBERON:0007245!8.46e-12!9;UBERON:0010009!8.46e-12!9;UBERON:0010011!8.46e-12!9;UBERON:0000454!8.46e-12!9;UBERON:0004121!2.64e-11!169;UBERON:0000924!8.16e-11!173;UBERON:0006601!8.16e-11!173;UBERON:0004111!9.50e-11!241;UBERON:0002619!4.14e-10!22;UBERON:0000369!1.26e-09!4;UBERON:0002435!1.26e-09!4;UBERON:0000204!1.26e-09!4;UBERON:0010082!1.26e-09!4;UBERON:0000483!2.02e-09!309;UBERON:0001950!2.10e-09!20;UBERON:0000119!3.34e-09!312;UBERON:0000200!6.27e-09!6;UBERON:0000477!3.16e-08!286;UBERON:0002240!3.56e-08!3;UBERON:0004733!4.32e-08!12;UBERON:0002028!4.32e-08!12;UBERON:0007277!4.32e-08!12;UBERON:0001896!1.58e-07!3;UBERON:0005290!1.58e-07!3;UBERON:0010096!1.58e-07!3;UBERON:0005383!1.80e-07!3;UBERON:0005382!1.80e-07!3;UBERON:0004732!2.18e-07!13;UBERON:0002771!2.47e-07!3;UBERON:0006331!3.85e-07!3;UBERON:0000988!4.11e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001875;8.10e-26;2!UBERON:0006514;8.10e-26;2!UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22!UBERON:0009663;2.26e-08;7!UBERON:0002420;8.61e-07;9!UBERON:0000125;8.61e-07;9!UBERON:0007245;8.61e-07;9!UBERON:0002308;8.61e-07;9!UBERON:0010009;8.61e-07;9!UBERON:0010011;8.61e-07;9!UBERON:0000454;8.61e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0001875;8.10e-26;2!UBERON:0006514;8.10e-26;2!UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22!UBERON:0009663;2.26e-08;7!UBERON:0002420;8.61e-07;9!UBERON:0000125;8.61e-07;9!UBERON:0007245;8.61e-07;9!UBERON:0002308;8.61e-07;9!UBERON:0010009;8.61e-07;9!UBERON:0010011;8.61e-07;9!UBERON:0000454;8.61e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0001875,9.18e-26,2;UBERON:0006514,9.18e-26,2;UBERON:0003135,4.28e-19,11;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22;UBERON:0009663,2.35e-08,7;UBERON:0002420,8.85e-07,9;UBERON:0000125,8.85e-07,9;UBERON:0007245,8.85e-07,9;UBERON:0002308,8.85e-07,9;UBERON:0010009,8.85e-07,9;UBERON:0010011,8.85e-07,9;UBERON:0000454,8.85e-07,9 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0.487932798790507,0.123121058076788,0,0,0,0.410623275218653,0.251085279189606,0.0764134057479513,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.315404830067869,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0.842516912477962,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0.344743373241465,0,0,0.885741385813839,0.120596438625408,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.943615861729479,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,1.20084057741958,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.364497339948148,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0.573409195690071,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.276516872303462,0,0.132864840313363,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0,0.615349092722265,0,0.414943514785307,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.135075169236789,0,0,0.317079050969534,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0.135939465953663,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.611923411718232,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0.250707539292375,3.18270532516606,7.77095977452918,0.829169439458779,0.20686599172379,0,0.23806443146374,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0.487932798790507,0.123121058076788,0,0,0,0.410623275218653,0.251085279189606,0.0764134057479513,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.315404830067869,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0.842516912477962,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0.344743373241465,0,0,0.885741385813839,0.120596438625408,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.943615861729479,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,1.20084057741958,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.364497339948148,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0.573409195690071,0.110929051536852,0.248385611765534,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.276516872303462,0,0.132864840313363,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0,0.615349092722265,0,0.414943514785307,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.135075169236789,0,0,0.317079050969534,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0.135939465953663,0.131545547125698,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.611923411718232,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0.250707539292375,3.18270532516606,7.77095977452918,0.829169439458779,0.20686599172379,0,0.23806443146374,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p12@CYB5R2 | |short_description=p12@CYB5R2 | ||
}} | }} |
Latest revision as of 13:44, 24 September 2015
Short description: | p12@CYB5R2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CYB5R2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 170bp_to_ENST00000533558_5end |
EntrezGene: | CYB5R2 |
HGNC: | 24376 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
globus pallidus | 9.18e-26 | 2 |
pallidum | 9.18e-26 | 2 |
male reproductive organ | 4.28e-19 | 11 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |
telencephalic nucleus | 2.35e-08 | 7 |
basal ganglion | 8.85e-07 | 9 |
neural nucleus | 8.85e-07 | 9 |
nuclear complex of neuraxis | 8.85e-07 | 9 |
nucleus of brain | 8.85e-07 | 9 |
aggregate regional part of brain | 8.85e-07 | 9 |
collection of basal ganglia | 8.85e-07 | 9 |
cerebral subcortex | 8.85e-07 | 9 |