FFCP PHASE1:Hg19::chr18:71928422..71928428,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1528 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2570 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UML1 | |||
|association_with_transcript=487bp_to_M22976_5end | |||
|cluster_id=chr18:71928422..71928428,- | |||
|coexpression_cluster_id=C477 | |||
|description=CAGE_peak_3_at_CYB5A_5end | |||
|id=chr18:71928422..71928428,- | |||
|ontology_enrichment_celltype=CL:0000136!1.53e-16!15;CL:0002195!1.48e-09!2;CL:0002571!1.48e-09!2;CL:0000325!5.67e-07!39 | |||
|ontology_enrichment_celltype_v019=CL:0002195;3.76e-24;2!CL:0002571;3.76e-24;2!CL:0000136;2.24e-22;13!CL:0002521;1.43e-16;3!CL:0000182;2.33e-09;12!CL:0002617;2.43e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002195,3.34e-24,2;CL:0002571,3.34e-24,2;CL:0000136,2.34e-19,15;CL:0002521,1.49e-16,3;CL:0000182,2.07e-09,12;CL:0002617,2.43e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.90e-13!19;UBERON:0006925!3.90e-13!19;UBERON:0008836!3.90e-13!19;UBERON:0007499!4.57e-12!25;UBERON:0009856!1.55e-11!26;UBERON:0008835!3.76e-11!22;UBERON:0003894!3.76e-11!22;UBERON:0009854!1.32e-10!23;UBERON:0009497!1.20e-09!25;UBERON:0000015!1.20e-09!25;UBERON:0002423!1.20e-09!25;UBERON:0006235!1.20e-09!25;UBERON:0004161!1.20e-09!25;UBERON:0002365!2.25e-09!31;UBERON:0002330!2.25e-09!31;UBERON:0005057!3.20e-09!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.67e-29;19!UBERON:0006925;1.67e-29;19!UBERON:0002423;2.62e-22;25!UBERON:0002365;1.50e-17;31!UBERON:0002330;1.50e-17;31!UBERON:0002190;1.43e-16;3!UBERON:0002368;3.63e-16;33!UBERON:0007029;2.78e-13;1!UBERON:0000949;1.08e-11;43!UBERON:0002072;2.53e-10;5!UBERON:0005172;6.21e-09;52!UBERON:0005173;6.21e-09;52!UBERON:0002530;9.05e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.35e-29,19;UBERON:0006925,1.35e-29,19;UBERON:0008836,1.35e-29,19;UBERON:0008835,1.70e-25,22;UBERON:0003894,1.70e-25,22;UBERON:0009854,2.29e-24,23;UBERON:0007499,2.23e-22,25;UBERON:0009497,2.23e-22,25;UBERON:0000015,2.23e-22,25;UBERON:0002423,2.23e-22,25;UBERON:0006235,2.23e-22,25;UBERON:0004161,2.23e-22,25;UBERON:0009856,1.69e-21,26;UBERON:0002365,6.05e-18,31;UBERON:0002330,6.05e-18,31;UBERON:0002190,1.49e-16,3;UBERON:0002368,7.86e-16,35;UBERON:0007029,2.62e-13,1;UBERON:0000949,3.49e-12,45;UBERON:0002417,1.27e-11,60;UBERON:0000916,1.27e-11,60;UBERON:0002072,2.59e-10,5;UBERON:0003929,4.75e-10,54;UBERON:0005172,4.75e-10,54;UBERON:0005173,4.75e-10,54;UBERON:0002530,3.82e-09,59;UBERON:0009569,2.13e-07,112 | |||
|phase1_expression=0,7.70761886007539,0,1.0007329835313,0.446961094427288,0,5.06599756336621,0,1.30592814099919,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.4382223522945,0.255725123687061,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0.8231480226628,0,3.80265104465493,1.96565443335525,2.95394953340702,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00169191121407,61.8588630146245,0,0,1.42156779497018,0.791951872933429,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23649213977267,0,0,0,0,0,0,0,0,0,0.214840489736547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823611089208164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0,0,0,0,0,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,6.00864158080138,2.65013777824443,0,0,0,0,0,0.314408610199332,0.828478110694391,0,0,0,0,0,0.2506898940227,0.919036730290385,1.31149052283922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.450772826991655,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.34282092365053,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@CYB5A | |||
}} |
Latest revision as of 13:53, 24 September 2015
Short description: | p3@CYB5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CYB5A_5end |
Coexpression cluster: | C477_Mesenchymal_Amniotic_Placental_chorionic_umbilical_Cardiac_acute |
Association with transcript: | 487bp_to_M22976_5end |
EntrezGene: | CYB5A |
HGNC: | 2570 |
UniProt: | Q9UML1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 3.34e-24 | 2 |
hepatic mesenchymal stem cell | 3.34e-24 | 2 |
fat cell | 2.34e-19 | 15 |
subcutaneous fat cell | 1.49e-16 | 3 |
hepatocyte | 2.07e-09 | 12 |
adipocyte of breast | 2.43e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 1.35e-29 | 19 |
digestive gland | 1.35e-29 | 19 |
liver bud | 1.35e-29 | 19 |
hepatic diverticulum | 1.70e-25 | 22 |
liver primordium | 1.70e-25 | 22 |
digestive tract diverticulum | 2.29e-24 | 23 |
epithelial sac | 2.23e-22 | 25 |
epithelium of foregut-midgut junction | 2.23e-22 | 25 |
anatomical boundary | 2.23e-22 | 25 |
hepatobiliary system | 2.23e-22 | 25 |
foregut-midgut junction | 2.23e-22 | 25 |
septum transversum | 2.23e-22 | 25 |
sac | 1.69e-21 | 26 |
exocrine gland | 6.05e-18 | 31 |
exocrine system | 6.05e-18 | 31 |
subcutaneous adipose tissue | 1.49e-16 | 3 |
endocrine gland | 7.86e-16 | 35 |
surface | 2.62e-13 | 1 |
endocrine system | 3.49e-12 | 45 |
abdominal segment of trunk | 1.27e-11 | 60 |
abdomen | 1.27e-11 | 60 |
hypodermis | 2.59e-10 | 5 |
gut epithelium | 4.75e-10 | 54 |
abdomen element | 4.75e-10 | 54 |
abdominal segment element | 4.75e-10 | 54 |
gland | 3.82e-09 | 59 |
subdivision of trunk | 2.13e-07 | 112 |