FFCP PHASE1:Hg19::chr7:100550117..100550128,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4584,57876 | |EntrezGene=4584,57876 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13384,7513 | |HGNC=13384,7513 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-201bp_to_ENST00000483133_5end | |association_with_transcript=-201bp_to_ENST00000483133_5end | ||
|cluster_id=chr7:100550117..100550128,+ | |||
|coexpression_cluster_id=C124 | |coexpression_cluster_id=C124 | ||
|description=CAGE_peak_20_at_MUC3A_5end,CAGE_peak_20_at_MUC3B_5end | |description=CAGE_peak_20_at_MUC3A_5end,CAGE_peak_20_at_MUC3B_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000039!1.04e-27!7;CL:0000586!1.04e-27!7 | |ontology_enrichment_celltype=CL:0000039!1.04e-27!7;CL:0000586!1.04e-27!7 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.54e-07;12 | |ontology_enrichment_celltype_v019=CL:0000182;1.54e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.52e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0006242;4.22e-21;1 | |ontology_enrichment_development_v019=UBERON:0006242;4.22e-21;1 | ||
|ontology_enrichment_disease=DOID:3095!1.84e-08!22;DOID:2994!1.84e-08!22;DOID:1799!5.06e-07!1;DOID:10165!5.06e-07!1;DOID:1798!5.06e-07!1 | |ontology_enrichment_disease=DOID:3095!1.84e-08!22;DOID:2994!1.84e-08!22;DOID:1799!5.06e-07!1;DOID:10165!5.06e-07!1;DOID:1798!5.06e-07!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.24e-09!27;UBERON:0005409!3.54e-09!35;UBERON:0004921!8.20e-08!129;UBERON:0004185!8.20e-08!129;UBERON:0002146!3.36e-07!1;UBERON:0005623!3.36e-07!1;UBERON:0003929!5.40e-07!54;UBERON:0001007!6.08e-07!155;UBERON:0001555!6.08e-07!155;UBERON:0007026!6.08e-07!155;UBERON:0000473!9.08e-07!8 | |ontology_enrichment_uberon=UBERON:0000160!2.24e-09!27;UBERON:0005409!3.54e-09!35;UBERON:0004921!8.20e-08!129;UBERON:0004185!8.20e-08!129;UBERON:0002146!3.36e-07!1;UBERON:0005623!3.36e-07!1;UBERON:0003929!5.40e-07!54;UBERON:0001007!6.08e-07!155;UBERON:0001555!6.08e-07!155;UBERON:0007026!6.08e-07!155;UBERON:0000473!9.08e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.24e-36;4!UBERON:0002146;6.98e-21;1!UBERON:0005623;6.98e-21;1!UBERON:0000160;4.16e-18;17!UBERON:0005409;2.89e-14;22!UBERON:0002370;3.89e-11;2!UBERON:0005058;3.89e-11;2!UBERON:0009113;3.89e-11;2!UBERON:0004921;8.23e-09;33!UBERON:0002114;4.52e-08;2!UBERON:0002110;6.34e-08;3!UBERON:0003978;7.50e-08;3!UBERON:0000946;7.50e-08;3!UBERON:0002423;9.35e-08;25 | |ontology_enrichment_uberon_v019=UBERON:0002108;1.24e-36;4!UBERON:0002146;6.98e-21;1!UBERON:0005623;6.98e-21;1!UBERON:0000160;4.16e-18;17!UBERON:0005409;2.89e-14;22!UBERON:0002370;3.89e-11;2!UBERON:0005058;3.89e-11;2!UBERON:0009113;3.89e-11;2!UBERON:0004921;8.23e-09;33!UBERON:0002114;4.52e-08;2!UBERON:0002110;6.34e-08;3!UBERON:0003978;7.50e-08;3!UBERON:0000946;7.50e-08;3!UBERON:0002423;9.35e-08;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.24e-36,4;UBERON:0002146,7.72e-21,1;UBERON:0005623,7.72e-21,1;UBERON:0000160,3.90e-18,17;UBERON:0005409,1.10e-12,25;UBERON:0001007,2.47e-08,145;UBERON:0001555,2.47e-08,145;UBERON:0007026,2.47e-08,145;UBERON:0002114,4.52e-08,2;UBERON:0004921,6.30e-08,118;UBERON:0002110,6.34e-08,3;UBERON:0006242,6.34e-08,3;UBERON:0003978,7.76e-08,3;UBERON:0009751,7.76e-08,3;UBERON:0000946,7.76e-08,3;UBERON:0002523,7.76e-08,3;UBERON:0005983,7.76e-08,3;UBERON:0002165,7.76e-08,3;UBERON:0002062,7.76e-08,3;UBERON:0007280,7.76e-08,3;UBERON:0009497,9.24e-08,25;UBERON:0000015,9.24e-08,25;UBERON:0002423,9.24e-08,25;UBERON:0006235,9.24e-08,25;UBERON:0004161,9.24e-08,25;UBERON:0004119,1.64e-07,160;UBERON:0000925,1.64e-07,160;UBERON:0006595,1.64e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,1.77236972004421,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.0897576444097721,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796118080530053,1.83309043480088,0.296521128680622,0,0,0,0,0,0,0,0,0,8.46935012340647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98834192635094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3749625440701,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523813388962845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975343399858155,0,0,0,0,0,0,0,0,0,0,5.47936522566407,7.43102505713455,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,12.6966441723696,0,0,0,0,0,0,0.305966489225945,0.26721740526556,0.18378979906969,0,0,0,0,0,0.213233981900981,0,1.16260037704811,0.744896571550295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,0,1.77236972004421,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.0897576444097721,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796118080530053,1.83309043480088,0.296521128680622,0,0,0,0,0,0,0,0,0,8.46935012340647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98834192635094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3749625440701,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523813388962845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975343399858155,0,0,0,0,0,0,0,0,0,0,5.47936522566407,7.43102505713455,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,12.6966441723696,0,0,0,0,0,0,0.305966489225945,0.26721740526556,0.18378979906969,0,0,0,0,0,0.213233981900981,0,1.16260037704811,0.744896571550295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p20@MUC3A,p20@MUC3B | |short_description=p20@MUC3A,p20@MUC3B | ||
}} | }} |
Latest revision as of 15:01, 24 September 2015
Short description: | p20@MUC3A, p20@MUC3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_MUC3A_5end, CAGE_peak_20_at_MUC3B_5end |
Coexpression cluster: | C124_small_temporal_duodenum_colon_gall_signet_Hepatocyte |
Association with transcript: | -201bp_to_ENST00000483133_5end |
EntrezGene: | 4584,57876 |
HGNC: | 7513&submit=Submit 13384, 7513 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.52e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
small intestine | 1.24e-36 | 4 |
pulmonary valve | 7.72e-21 | 1 |
semi-lunar valve | 7.72e-21 | 1 |
intestine | 3.90e-18 | 17 |
gastrointestinal system | 1.10e-12 | 25 |
digestive system | 2.47e-08 | 145 |
digestive tract | 2.47e-08 | 145 |
primitive gut | 2.47e-08 | 145 |
duodenum | 4.52e-08 | 2 |
subdivision of digestive tract | 6.30e-08 | 118 |
gallbladder | 6.34e-08 | 3 |
gall bladder primordium | 6.34e-08 | 3 |
valve | 7.76e-08 | 3 |
cardiac mesenchyme | 7.76e-08 | 3 |
cardial valve | 7.76e-08 | 3 |
tunica intima | 7.76e-08 | 3 |
heart layer | 7.76e-08 | 3 |
endocardium | 7.76e-08 | 3 |
endocardial cushion | 7.76e-08 | 3 |
presumptive endocardium | 7.76e-08 | 3 |
epithelium of foregut-midgut junction | 9.24e-08 | 25 |
anatomical boundary | 9.24e-08 | 25 |
hepatobiliary system | 9.24e-08 | 25 |
foregut-midgut junction | 9.24e-08 | 25 |
septum transversum | 9.24e-08 | 25 |
endoderm-derived structure | 1.64e-07 | 160 |
endoderm | 1.64e-07 | 160 |
presumptive endoderm | 1.64e-07 | 160 |