FFCP PHASE1:Hg19::chr6:127840048..127840074,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=387104 | |EntrezGene=387104 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21494 | |HGNC=21494 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000467753_5end | |association_with_transcript=0bp_to_ENST00000467753_5end | ||
|cluster_id=chr6:127840048..127840074,- | |||
|coexpression_cluster_id=C4555 | |||
|description=CAGE_peak_5_at_C6orf174_5end | |description=CAGE_peak_5_at_C6orf174_5end | ||
|id=chr6:127840048..127840074,- | |id=chr6:127840048..127840074,- | ||
|ontology_enrichment_celltype=CL:0000133!6.53e-17!59;CL:0000055!9.11e-14!180;CL:0000221!2.13e-13!71;CL:0002319!1.22e-12!25;CL:0000333!1.40e-12!41;CL:0000047!6.55e-09!8;CL:0000540!8.08e-07!6;CL:0000031!8.08e-07!6;CL:0000404!8.08e-07!6 | |ontology_enrichment_celltype=CL:0000133!6.53e-17!59;CL:0000055!9.11e-14!180;CL:0000221!2.13e-13!71;CL:0002319!1.22e-12!25;CL:0000333!1.40e-12!41;CL:0000047!6.55e-09!8;CL:0000540!8.08e-07!6;CL:0000031!8.08e-07!6;CL:0000404!8.08e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002319;4.73e-18;25!CL:0000540;1.23e-14;6!CL:0000404;1.23e-14;6!CL:1000497;3.97e-08;17!CL:0002518;3.97e-08;17!CL:0000064;6.15e-08;3!CL:0000067;6.15e-08;3!CL:0005012;6.15e-08;3!CL:0002304;6.15e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.15e-19,8;CL:0000133,3.30e-18,59;CL:0002319,4.69e-18,25;CL:0000540,2.47e-14,6;CL:0000031,2.47e-14,6;CL:0000404,2.47e-14,6;CL:0000221,7.45e-14,72;CL:1000497,3.32e-08,17;CL:0002518,3.32e-08,17;CL:0000064,4.17e-08,3;CL:0000067,4.17e-08,3;CL:0005012,4.17e-08,3;CL:0002304,4.17e-08,3;CL:0000333,1.47e-07,41 | |||
|ontology_enrichment_development_v019=CL:0000031;1.23e-14;6!CL:0000133;1.78e-09;59!CL:0000221;8.49e-07;72 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;5.48e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,5.71e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.25e-27!82;UBERON:0000073!1.74e-27!94;UBERON:0001016!1.74e-27!94;UBERON:0005743!3.14e-26!86;UBERON:0001049!2.52e-21!57;UBERON:0005068!2.52e-21!57;UBERON:0006241!2.52e-21!57;UBERON:0007135!2.52e-21!57;UBERON:0003075!8.04e-20!86;UBERON:0007284!8.04e-20!86;UBERON:0002346!9.07e-20!90;UBERON:0000924!1.39e-19!173;UBERON:0006601!1.39e-19!173;UBERON:0004121!2.15e-19!169;UBERON:0000955!6.08e-19!69;UBERON:0006238!6.08e-19!69;UBERON:0002616!7.68e-19!59;UBERON:0000033!2.93e-15!123;UBERON:0003056!1.76e-14!61;UBERON:0002780!9.81e-14!41;UBERON:0001890!9.81e-14!41;UBERON:0006240!9.81e-14!41;UBERON:0000153!1.32e-13!129;UBERON:0007811!1.32e-13!129;UBERON:0002020!2.41e-13!34;UBERON:0003528!2.41e-13!34;UBERON:0003080!3.63e-13!42;UBERON:0001893!4.47e-13!34;UBERON:0002791!1.58e-12!33;UBERON:0001869!2.10e-12!32;UBERON:0000119!5.32e-12!312;UBERON:0000483!1.29e-11!309;UBERON:0000475!2.16e-11!365;UBERON:0000956!1.78e-10!25;UBERON:0000203!1.78e-10!25;UBERON:0003076!5.74e-10!15;UBERON:0003057!5.74e-10!15;UBERON:0000025!3.66e-09!194;UBERON:0000481!1.48e-08!347;UBERON:0001950!1.68e-08!20;UBERON:0002619!3.09e-08!22;UBERON:0004733!3.55e-08!12;UBERON:0002028!3.55e-08!12;UBERON:0007277!3.55e-08!12;UBERON:0000064!2.27e-07!219;UBERON:0004732!2.72e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;6.15e-08;3!UBERON:0001775;6.15e-08;3!UBERON:0000353;4.04e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.68e-13,89;UBERON:0001017,3.68e-11,81;UBERON:0001778,4.17e-08,3;UBERON:0001775,4.17e-08,3;UBERON:0004121,4.23e-08,171;UBERON:0000924,4.23e-08,171;UBERON:0006601,4.23e-08,171;UBERON:0000353,2.88e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,1.46062018077475,0,0.984968464614303,0.816002764977012,1.25381888591235,0.85870796139317,3.55873505189499,2.63639543149086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0.260118695119756,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.144846518960824,0.795285947051099,0,1.32348744029695,2.21729397462564,1.84453049955565,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0,0.573673241497627,0,0,0,0,0,0,0.163461903113459,0,0,0,0.312160076830321,0,0.597794722207204,0.939475989150119,0.485618833104395,1.12360645361799,0.61246251376468,2.57952066354713,0.206651562351531,0,0.247266929278557,0,0,0.673344455816265,0.375355559615893,0.277064115484183,0.438977620880838,0,0.150238058906597,0.113432183160021,0,0,0,0.300091096084402,0.206105058476878,0.257640540045629,0,0.337552664482532,0.0974370051611986,0,0,0,0,0.201504196455281,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0.756962552626885,0.36497735907583,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,1.26755034821831,0,0,0,0,0.686271241194102,0,0,0,0,0,3.11980435583874,0,0.463721619900307,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.952468414382536,0.763976851116555,2.34434894420094,1.71072446022705,0.411309970813294,0.901029173531752,0.857479297891735,0.448524337381443,0,0.2933531432838,0.129271715757778,3.57656445851882,0,0,0,0.771622122786426,0,1.3321108950805,0,0,0,0.65147236858747,0,0,0.301439377059586,1.74306691720059,0.499864955910285,0,0,0,0,0,0,0.144781306667579,0,0.537182889719687,0,0,0,0,3.81141936333695,7.8083912314573,3.09315525111078,2.51274398001523,2.55175500661265,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0,0,0,0,0,0,0.184369168541703,0.521301686808497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.925258162815933,0.355123450626254,1.06765302817952,0.519254429183621,0.232420756919918,0,0,0,0,0.182091168006717,0,0.451199612907412,1.38627606787947,0,0,3.0609972378934,0,0,1.29549549661284,0,2.43851793789468,2.50844886927427,0.509752546090077,0.831076008928724,1.79099803777743,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0.386682873168488,0.924291702687866,1.84204409671355,1.10269257987624,0.966782203814463,2.46528379654188,2.55679882248303,0.267096106940212,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0.37064843820784,0.286249773483982,1.116475108079,0.316379424718726,0,0,0,0,0,0.539617372749944,0.54907405947211,0.824686816419805,0.202182481573316,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,1.15755106853338,0,0,0,1.12678241012897,1.14729081763241,0.491245205065606,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55722532125772,0,0,0,0,0.140669416410513,0,0,0.63337622438398,0,0,1.51159648712566,0,0,0,0,0,0,0,0,0,0,0.556608588971108,5.98841394003583,0,0,0,0,0,0,8.27384095779515,0.583209226766509,2.95162491386597,0,0.120596438625408,0,0.663475559587348,1.47773809476774,0.438770794307945,0,0,0,2.96249345202203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05499032264014,0,0,0,0,0,0.611030144933625,0.593042257361244,0.494255755786011,0.522109747527277,0.337005664903385,0,0.468528891450678,0,0,0,0,0,3.36680037793539,0.063186579628488,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90392296312213,0,0.794858446811959,0.759729551470544,0,2.80555870880368,0,0,0,0,1.02956998717179,0,0,0,0,0,0,1.73370353940911,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,1.12527203925513,1.2378549293751,1.24632101408756,0,0,0.425246896606173,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,1.19271615249795,0.226624183040251,0,0,0.517131825446202,1.3223260174269,1.36869470307464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.610131324509816,0.625954653532499,0.573409195690071,0.887432412294818,1.1177352529449,0,0.37494122388632,0,0,0,3.74667924645505,3.76794674388145,0.447764408660622,0.233713309847224,0.554805861502613,0,0,0,0,0.151230923763239,0.310874401165561,0.591420599958536,0.159296767163702,1.34940933649081,1.39736661188633,0,0.265841714557995,0,0.300515217994437,0,1.22061219961398,0,0.537052785212442,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.38107189034688,0,0,0.691292180758654,0,0,0,0,0,0,3.39978572953381,0,0,0,0,0,0,4.73209173823511,19.6241156741961,0,10.8117541810094,0,0.637724760305049,0,0,0,0,4.80342448971282,0,0,0.513833800771676,0,0.319267718114302,0.41023272848151,6.80593579798639,0.691572524642179,0.807378228159255,0,0,0,0,0,0,0,0,0,0.60511520611056,0,0,0,0,0.607838261565552,0,0.620060389503552,0.443910671357348,6.01672289920042,0,0,0.175871244359621,0,0,1.68141861109412,1.21393120847326,0.682986574053893,0,0,0,0.815636795721981,0.526182188502793,0,0,0,0.314231179832004,0,4.56579360254748,1.29556554731173,2.8665101273223,0.214429632529969,4.89842196371452,0,0,0,0,0,0,0,0.473328002922261,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,1.16969731731053,0,0,0,1.31928620094515,4.22695961986686,0.0771741581079447,0.218559560503957,0,0,4.00650130072764,1.17785080268967,0.297046400327086,0.8453114551668,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.543931921527318,4.36350690340377,0.5290268405154,0,0,0,0,0.218531143927391,0.253397002022874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,0,1.46062018077475,0,0.984968464614303,0.816002764977012,1.25381888591235,0.85870796139317,3.55873505189499,2.63639543149086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0.260118695119756,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.144846518960824,0.795285947051099,0,1.32348744029695,2.21729397462564,1.84453049955565,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0.417989933073621,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0,0.573673241497627,0,0,0,0,0,0,0.163461903113459,0,0,0,0.312160076830321,0,0.597794722207204,0.939475989150119,0.485618833104395,1.12360645361799,0.61246251376468,2.57952066354713,0.206651562351531,0,0.247266929278557,0,0,0.673344455816265,0.375355559615893,0.277064115484183,0.438977620880838,0,0.150238058906597,0.113432183160021,0,0,0,0.300091096084402,0.206105058476878,0.257640540045629,0,0.337552664482532,0.0974370051611986,0,0,0,0,0.201504196455281,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0.756962552626885,0.36497735907583,0,0.643240938192885,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,1.26755034821831,0,0,0,0,0.686271241194102,0,0,0,0,0,3.11980435583874,0,0.463721619900307,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.952468414382536,0.763976851116555,2.34434894420094,1.71072446022705,0.411309970813294,0.901029173531752,0.857479297891735,0.448524337381443,0,0.2933531432838,0.129271715757778,3.57656445851882,0,0,0,0.771622122786426,0,1.3321108950805,0,0,0,0.65147236858747,0,0,0.301439377059586,1.74306691720059,0.499864955910285,0,0,0,0,0,0,0.144781306667579,0,0.537182889719687,0,0,0,0,3.81141936333695,7.8083912314573,3.09315525111078,2.51274398001523,2.55175500661265,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0,0,0,0,0,0,0.184369168541703,0.521301686808497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.925258162815933,0.355123450626254,1.06765302817952,0.519254429183621,0.232420756919918,0,0,0,0,0.182091168006717,0,0.451199612907412,1.38627606787947,0,0,3.0609972378934,0,0,1.29549549661284,0,2.43851793789468,2.50844886927427,0.509752546090077,0.831076008928724,1.79099803777743,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0.386682873168488,0.924291702687866,1.84204409671355,1.10269257987624,0.966782203814463,2.46528379654188,2.55679882248303,0.267096106940212,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0.37064843820784,0.286249773483982,1.116475108079,0.316379424718726,0,0,0,0,0,0.539617372749944,0.54907405947211,0.824686816419805,0.202182481573316,0,0,0,0.243713489631284,0,0,0.141405431953713,0,0,0,0,1.15755106853338,0,0,0,1.12678241012897,1.14729081763241,0.491245205065606,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55722532125772,0,0,0,0,0.140669416410513,0,0,0.63337622438398,0,0,1.51159648712566,0,0,0,0,0,0,0,0,0,0,0.556608588971108,5.98841394003583,0,0,0,0,0,0,8.27384095779515,0.583209226766509,2.95162491386597,0,0.120596438625408,0,0.663475559587348,1.47773809476774,0.438770794307945,0,0,0,2.96249345202203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05499032264014,0,0,0,0,0,0.611030144933625,0.593042257361244,0.494255755786011,0.522109747527277,0.337005664903385,0,0.468528891450678,0,0,0,0,0,3.36680037793539,0.063186579628488,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90392296312213,0,0.794858446811959,0.759729551470544,0,2.80555870880368,0,0,0,0,1.02956998717179,0,0,0,0,0,0,1.73370353940911,0.600420288709789,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,1.12527203925513,1.2378549293751,1.24632101408756,0,0,0.425246896606173,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,1.19271615249795,0.226624183040251,0,0,0.517131825446202,1.3223260174269,1.36869470307464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.610131324509816,0.625954653532499,0.573409195690071,0.887432412294818,1.1177352529449,0,0.37494122388632,0,0,0,3.74667924645505,3.76794674388145,0.447764408660622,0.233713309847224,0.554805861502613,0,0,0,0,0.151230923763239,0.310874401165561,0.591420599958536,0.159296767163702,1.34940933649081,1.39736661188633,0,0.265841714557995,0,0.300515217994437,0,1.22061219961398,0,0.537052785212442,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.38107189034688,0,0,0.691292180758654,0,0,0,0,0,0,3.39978572953381,0,0,0,0,0,0,4.73209173823511,19.6241156741961,0,10.8117541810094,0,0.637724760305049,0,0,0,0,4.80342448971282,0,0,0.513833800771676,0,0.319267718114302,0.41023272848151,6.80593579798639,0.691572524642179,0.807378228159255,0,0,0,0,0,0,0,0,0,0.60511520611056,0,0,0,0,0.607838261565552,0,0.620060389503552,0.443910671357348,6.01672289920042,0,0,0.175871244359621,0,0,1.68141861109412,1.21393120847326,0.682986574053893,0,0,0,0.815636795721981,0.526182188502793,0,0,0,0.314231179832004,0,4.56579360254748,1.29556554731173,2.8665101273223,0.214429632529969,4.89842196371452,0,0,0,0,0,0,0,0.473328002922261,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0,1.16969731731053,0,0,0,1.31928620094515,4.22695961986686,0.0771741581079447,0.218559560503957,0,0,4.00650130072764,1.17785080268967,0.297046400327086,0.8453114551668,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.543931921527318,4.36350690340377,0.5290268405154,0,0,0,0,0.218531143927391,0.253397002022874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p5@C6orf174 | |short_description=p5@C6orf174 | ||
}} | }} |
Latest revision as of 15:10, 24 September 2015
Short description: | p5@C6orf174 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_C6orf174_5end |
Coexpression cluster: | C4555_neuroblastoma_occipital_parietal_carcinoid_brain_Neural_mesothelioma |
Association with transcript: | 0bp_to_ENST00000467753_5end |
EntrezGene: | C6orf174 |
HGNC: | 21494 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.15e-19 | 8 |
neurectodermal cell | 3.30e-18 | 59 |
neural cell | 4.69e-18 | 25 |
neuron | 2.47e-14 | 6 |
neuroblast | 2.47e-14 | 6 |
electrically signaling cell | 2.47e-14 | 6 |
ectodermal cell | 7.45e-14 | 72 |
kidney cell | 3.32e-08 | 17 |
kidney epithelial cell | 3.32e-08 | 17 |
ciliated cell | 4.17e-08 | 3 |
ciliated epithelial cell | 4.17e-08 | 3 |
multi-ciliated epithelial cell | 4.17e-08 | 3 |
non-pigmented ciliary epithelial cell | 4.17e-08 | 3 |
migratory neural crest cell | 1.47e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
nervous system | 4.68e-13 | 89 |
central nervous system | 3.68e-11 | 81 |
ciliary epithelium | 4.17e-08 | 3 |
ciliary body | 4.17e-08 | 3 |
ectoderm-derived structure | 4.23e-08 | 171 |
ectoderm | 4.23e-08 | 171 |
presumptive ectoderm | 4.23e-08 | 171 |
parenchyma | 2.88e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 5.71e-08 | 6 |