FFCP PHASE1:Hg19::chr19:6393395..6393444,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2962 | |EntrezGene=2962 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4652 | |HGNC=4652 | ||
|TSSclassifier=strong | |||
|UniProt=P35269 | |UniProt=P35269 | ||
|association_with_transcript=26bp_to_ENST00000394456_5end | |association_with_transcript=26bp_to_ENST00000394456_5end | ||
|cluster_id=chr19:6393395..6393444,- | |||
|description=CAGE_peak_3_at_GTF2F1_5end | |description=CAGE_peak_3_at_GTF2F1_5end | ||
|id=chr19:6393395..6393444,- | |id=chr19:6393395..6393444,- | ||
|ontology_enrichment_celltype=CL:0000144!3.29e-19!625;CL:0002371!1.38e-16!591;CL:0000012!2.38e-12!682;CL:0000548!1.56e-11!679;CL:0000004!1.56e-11!679;CL:0000255!1.56e-11!679;CL:0000003!1.14e-10!722;CL:0000055!1.42e-09!180;CL:0000723!1.95e-09!436;CL:0000034!2.13e-09!444;CL:0000048!4.45e-09!430;CL:0000219!7.79e-08!390 | |ontology_enrichment_celltype=CL:0000144!3.29e-19!625;CL:0002371!1.38e-16!591;CL:0000012!2.38e-12!682;CL:0000548!1.56e-11!679;CL:0000004!1.56e-11!679;CL:0000255!1.56e-11!679;CL:0000003!1.14e-10!722;CL:0000055!1.42e-09!180;CL:0000723!1.95e-09!436;CL:0000034!2.13e-09!444;CL:0000048!4.45e-09!430;CL:0000219!7.79e-08!390 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,4.10e-10,433;CL:0000034,4.51e-10,441;CL:0000048,9.62e-10,427;CL:0000219,1.71e-08,386;CL:0002320,3.52e-07,361;CL:0000134,4.95e-07,354 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@GTF2F1 | |short_description=p3@GTF2F1 | ||
}} | }} |
Latest revision as of 15:46, 24 September 2015
Short description: | p3@GTF2F1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GTF2F1_5end |
Coexpression cluster: | NA |
Association with transcript: | 26bp_to_ENST00000394456_5end |
EntrezGene: | GTF2F1 |
HGNC: | 4652 |
UniProt: | P35269 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 4.10e-10 | 433 |
stem cell | 4.51e-10 | 441 |
multi fate stem cell | 9.62e-10 | 427 |
motile cell | 1.71e-08 | 386 |
connective tissue cell | 3.52e-07 | 361 |
mesenchymal cell | 4.95e-07 | 354 |