FFCP PHASE1:Hg19::chr4:110749110..110749115,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10692 | |EntrezGene=10692 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10450 | |HGNC=10450 | ||
|TSSclassifier=strong | |||
|UniProt=O14718 | |UniProt=O14718 | ||
|association_with_transcript=-34bp_to_ENST00000317735,NM_006583,uc003hzv.2_5end | |association_with_transcript=-34bp_to_ENST00000317735,NM_006583,uc003hzv.2_5end | ||
|cluster_id=chr4:110749110..110749115,+ | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_4_at_RRH_5end | |description=CAGE_peak_4_at_RRH_5end | ||
|id=chr4:110749110..110749115,+ | |id=chr4:110749110..110749115,+ | ||
|ontology_enrichment_celltype=CL:0002322!3.22e-09!5 | |ontology_enrichment_celltype=CL:0002322!3.22e-09!5 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.39e-66;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002771!1.60e-14!3;UBERON:0000966!2.53e-09!5;UBERON:0005388!2.53e-09!5;UBERON:0001802!2.53e-09!5;UBERON:0001872!3.49e-09!5;UBERON:0000970!5.26e-09!20;UBERON:0002104!1.27e-08!21;UBERON:0001950!1.53e-08!20;UBERON:0000020!5.87e-08!23;UBERON:0000200!6.34e-08!6;UBERON:0002619!6.98e-08!22;UBERON:0001032!1.15e-07!24;UBERON:0004456!1.15e-07!24;UBERON:0000956!4.41e-07!25;UBERON:0000203!4.41e-07!25 | |ontology_enrichment_uberon=UBERON:0002771!1.60e-14!3;UBERON:0000966!2.53e-09!5;UBERON:0005388!2.53e-09!5;UBERON:0001802!2.53e-09!5;UBERON:0001872!3.49e-09!5;UBERON:0000970!5.26e-09!20;UBERON:0002104!1.27e-08!21;UBERON:0001950!1.53e-08!20;UBERON:0000020!5.87e-08!23;UBERON:0000200!6.34e-08!6;UBERON:0002619!6.98e-08!22;UBERON:0001032!1.15e-07!24;UBERON:0004456!1.15e-07!24;UBERON:0000956!4.41e-07!25;UBERON:0000203!4.41e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.48e-40;5!UBERON:0005388;1.48e-40;5!UBERON:0001802;1.48e-40;5!UBERON:0000019;6.95e-12;19!UBERON:0000047;6.95e-12;19!UBERON:0004088;6.95e-12;19!UBERON:0010230;6.95e-12;19!UBERON:0000970;2.29e-11;20!UBERON:0002104;6.74e-11;21!UBERON:0001456;6.74e-11;21!UBERON:0000020;4.42e-10;23!UBERON:0001032;1.01e-09;24!UBERON:0004456;1.01e-09;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,4.27e-34,6;UBERON:0005388,4.27e-34,6;UBERON:0001802,4.27e-34,6;UBERON:0000019,2.29e-11,20;UBERON:0000047,2.29e-11,20;UBERON:0010312,2.29e-11,20;UBERON:0004088,2.29e-11,20;UBERON:0010230,2.29e-11,20;UBERON:0003072,2.29e-11,20;UBERON:0004128,2.29e-11,20;UBERON:0003071,2.29e-11,20;UBERON:0000970,6.74e-11,21;UBERON:0002104,6.74e-11,21;UBERON:0001456,1.80e-10,22;UBERON:0000020,1.01e-09,24;UBERON:0001032,1.01e-09,24;UBERON:0004456,1.01e-09,24;UBERON:0005085,7.41e-08,31 | |||
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|short_description=p4@RRH | |short_description=p4@RRH | ||
}} | }} |
Latest revision as of 16:32, 24 September 2015
Short description: | p4@RRH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RRH_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | -34bp_to_ENST00000317735, NM_006583, uc003hzv.2_5end |
EntrezGene: | RRH |
HGNC: | 10450 |
UniProt: | O14718 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retina | 4.27e-34 | 6 |
photoreceptor array | 4.27e-34 | 6 |
posterior segment of eyeball | 4.27e-34 | 6 |
camera-type eye | 2.29e-11 | 20 |
simple eye | 2.29e-11 | 20 |
immature eye | 2.29e-11 | 20 |
ocular region | 2.29e-11 | 20 |
eyeball of camera-type eye | 2.29e-11 | 20 |
optic cup | 2.29e-11 | 20 |
optic vesicle | 2.29e-11 | 20 |
eye primordium | 2.29e-11 | 20 |
eye | 6.74e-11 | 21 |
visual system | 6.74e-11 | 21 |
face | 1.80e-10 | 22 |
sense organ | 1.01e-09 | 24 |
sensory system | 1.01e-09 | 24 |
entire sense organ system | 1.01e-09 | 24 |
ectodermal placode | 7.41e-08 | 31 |