FFCP PHASE1:Hg19::chr7:99698956..99699038,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4176 | |EntrezGene=4176 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6950 | |HGNC=6950 | ||
|TSSclassifier=strong | |||
|UniProt=F5H4S2 | |UniProt=F5H4S2 | ||
|association_with_transcript=0bp_to_ENST00000362082,ENST00000463722,ENST00000489841_5end | |association_with_transcript=0bp_to_ENST00000362082,ENST00000463722,ENST00000489841_5end | ||
|cluster_id=chr7:99698956..99699038,- | |||
|coexpression_cluster_id=C281 | |||
|description=CAGE_peak_1_at_MCM7_5end | |description=CAGE_peak_1_at_MCM7_5end | ||
|id=chr7:99698956..99699038,- | |id=chr7:99698956..99699038,- | ||
|ontology_enrichment_celltype=CL:0000066!1.11e-19!254;CL:0000012!1.66e-18!682;CL:0000548!7.96e-18!679;CL:0000004!7.96e-18!679;CL:0000255!7.96e-18!679;CL:0000003!2.66e-11!722;CL:0002321!3.38e-09!248;CL:0000220!1.07e-08!246;CL:0000063!3.54e-08!578;CL:0000333!5.08e-07!41;CL:0002319!7.90e-07!25 | |ontology_enrichment_celltype=CL:0000066!1.11e-19!254;CL:0000012!1.66e-18!682;CL:0000548!7.96e-18!679;CL:0000004!7.96e-18!679;CL:0000255!7.96e-18!679;CL:0000003!2.66e-11!722;CL:0002321!3.38e-09!248;CL:0000220!1.07e-08!246;CL:0000063!3.54e-08!578;CL:0000333!5.08e-07!41;CL:0002319!7.90e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0002319;7.51e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.11e-20,253;CL:0002321,4.26e-09,250;CL:0000333,5.08e-07,41;CL:0002319,7.90e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.13e-43!235;DOID:14566!4.84e-42!239;DOID:0050687!1.12e-21!143;DOID:0050686!4.92e-21!137;DOID:2531!1.18e-20!51;DOID:0060083!1.18e-20!51;DOID:305!5.33e-19!106;DOID:1240!7.57e-17!39;DOID:8692!7.73e-13!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.91e-13;39!DOID:2531;5.63e-13;51!DOID:0060083;5.63e-13;51!DOID:8692;1.57e-12;31!DOID:305;8.51e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.12e-43,235;DOID:14566,4.84e-42,239;DOID:0050687,1.12e-21,143;DOID:0050686,4.92e-21,137;DOID:2531,1.18e-20,51;DOID:0060083,1.18e-20,51;DOID:305,5.33e-19,106;DOID:1240,7.57e-17,39;DOID:8692,7.72e-13,31 | |||
|ontology_enrichment_uberon=UBERON:0000072!2.45e-07!46;UBERON:0001737!8.71e-07!9 | |ontology_enrichment_uberon=UBERON:0000072!2.45e-07!46;UBERON:0001737!8.71e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.68e-07;9!UBERON:0001557;8.68e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000072,8.55e-07,47;UBERON:0001737,8.71e-07,9 | |||
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| ||
|short_description=p1@MCM7 | |short_description=p1@MCM7 | ||
}} | }} |
Latest revision as of 17:16, 24 September 2015
Short description: | p1@MCM7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MCM7_5end |
Coexpression cluster: | C281_Hodgkin_Reticulocytes_chronic_NK_acute_retinoblastoma_small |
Association with transcript: | 0bp_to_ENST00000362082, ENST00000463722, ENST00000489841_5end |
EntrezGene: | MCM7 |
HGNC: | 6950 |
UniProt: | F5H4S2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.11e-20 | 253 |
embryonic cell | 4.26e-09 | 250 |
migratory neural crest cell | 5.08e-07 | 41 |
neural cell | 7.90e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
segment of respiratory tract | 8.55e-07 | 47 |
larynx | 8.71e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.12e-43 | 235 |
disease of cellular proliferation | 4.84e-42 | 239 |
cell type cancer | 1.12e-21 | 143 |
organ system cancer | 4.92e-21 | 137 |
hematologic cancer | 1.18e-20 | 51 |
immune system cancer | 1.18e-20 | 51 |
carcinoma | 5.33e-19 | 106 |
leukemia | 7.57e-17 | 39 |
myeloid leukemia | 7.72e-13 | 31 |