FFCP PHASE1:Hg19::chr19:6591173..6591184,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:6591173..6591184,-
|short_description=p7@CD70
|description=CAGE_peak_7_at_CD70_5end
|association_with_transcript=-10bp_to_ENST00000245903,NM_001252,uc002m...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=970 | |EntrezGene=970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11937 | |HGNC=11937 | ||
|TSSclassifier=strong | |||
|UniProt=P32970,Q53XX4 | |UniProt=P32970,Q53XX4 | ||
|association_with_transcript=-10bp_to_ENST00000245903,NM_001252,uc002mfi.2,uc010xjf.1_5end | |||
|cluster_id=chr19:6591173..6591184,- | |||
|coexpression_cluster_id=C1828 | |||
|description=CAGE_peak_7_at_CD70_5end | |||
|id=chr19:6591173..6591184,- | |||
|ontology_enrichment_celltype=CL:1000497!2.62e-13!18;CL:0002518!2.62e-13!18;CL:1000449!4.32e-11!16;CL:1000507!5.65e-11!12;CL:1000494!5.65e-11!12;CL:0002681!3.71e-08!13;CL:0002584!3.71e-08!13;CL:0000066!2.77e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:1000497;3.59e-11;17!CL:0002518;3.59e-11;17!CL:1000449;6.31e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,9.98e-12,17;CL:0002518,9.98e-12,17;CL:1000449,3.18e-08,15;CL:1000507,6.99e-07,10;CL:1000494,6.99e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.75e-10;29 | |||
|ontology_enrichment_disease=DOID:14566!2.37e-17!239;DOID:162!1.22e-16!235;DOID:305!1.51e-09!106;DOID:0050686!1.62e-09!137;DOID:0050687!8.95e-09!143;DOID:0060058!3.00e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,2.02e-11,239;DOID:162,2.95e-10,235 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.14e-13!9;UBERON:0002113!1.31e-12!27;UBERON:0003918!1.31e-12!27;UBERON:0005095!1.31e-12!27;UBERON:0007687!1.31e-12!27;UBERON:0004211!4.32e-11!16;UBERON:0001285!4.32e-11!16;UBERON:0007684!4.32e-11!16;UBERON:0003220!4.32e-11!16;UBERON:0004208!4.32e-11!16;UBERON:0009773!5.65e-11!12;UBERON:0001231!5.65e-11!12;UBERON:0004810!5.65e-11!12;UBERON:0000489!9.65e-11!32;UBERON:0006555!3.23e-10!17;UBERON:0005103!3.23e-10!17;UBERON:0000083!3.23e-10!17;UBERON:0009201!3.23e-10!17;UBERON:0004819!3.23e-10!17;UBERON:0006553!3.23e-10!17;UBERON:0003074!3.23e-10!17;UBERON:0003060!3.23e-10!17;UBERON:0000080!1.92e-09!18;UBERON:0002120!1.92e-09!18;UBERON:0004875!1.92e-09!18;UBERON:0005721!1.92e-09!18;UBERON:0005754!1.92e-09!18;UBERON:0007297!1.92e-09!18;UBERON:0001851!3.66e-09!16;UBERON:0003887!4.00e-09!21;UBERON:0001225!3.71e-08!13;UBERON:0008987!3.71e-08!13;UBERON:0004876!3.87e-08!20;UBERON:0006554!5.50e-08!44;UBERON:0000058!9.15e-08!26;UBERON:0005172!1.12e-07!55;UBERON:0005173!1.12e-07!55;UBERON:0001008!1.12e-07!45;UBERON:0005177!2.14e-07!107;UBERON:0001557!2.68e-07!19;UBERON:0000353!6.04e-07!17;UBERON:0008947!7.00e-07!38;UBERON:0003258!7.00e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.36e-26;9!UBERON:0001557;2.36e-26;9!UBERON:0002113;3.98e-11;24!UBERON:0011143;3.98e-11;24!UBERON:0000489;8.24e-09;29!UBERON:0006554;1.93e-08;30!UBERON:0001008;1.93e-08;30!UBERON:0000072;3.91e-08;37!UBERON:0006555;6.31e-08;15!UBERON:0004819;6.31e-08;15!UBERON:0001285;6.31e-08;15!UBERON:0007684;6.31e-08;15!UBERON:0000065;4.68e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.33e-26,9;UBERON:0001557,1.98e-11,19;UBERON:0002113,1.28e-10,26;UBERON:0003918,1.28e-10,26;UBERON:0011143,1.28e-10,26;UBERON:0005095,1.28e-10,26;UBERON:0007687,1.28e-10,26;UBERON:0000489,1.59e-08,31;UBERON:0008947,1.63e-08,38;UBERON:0003258,1.63e-08,38;UBERON:0004211,3.18e-08,15;UBERON:0009773,3.18e-08,15;UBERON:0001231,3.18e-08,15;UBERON:0001285,3.18e-08,15;UBERON:0007684,3.18e-08,15;UBERON:0004208,3.18e-08,15;UBERON:0006555,1.22e-07,16;UBERON:0004819,1.22e-07,16;UBERON:0004810,6.99e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.246242116153576,0.408001382488506,0.626909442956176,0,0,0,0.916960868975415,1.23150884174919,1.41679406364623,0,0,0,0,0.6024118375565,0,0.619737604642413,1.42169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00269411196656,0,0,0,1.5370958367081,1.30059347559878,0.164437904603676,0.829050053357545,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,0,0.545492241181669,0.573609190778008,0,0.132529768321485,0,0,0.504641701751257,0,0,0,0,0,0,3.54920400119532,3.87744787179634,3.13314338848527,3.52940712743661,3.4860711054785,4.27087114399974,4.71909578560575,3.33576490713088,5.00171304030308,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0.766765358330422,0,0.264145302039678,0,0.144119953416961,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0.15403067420883,2.35304930753057,1.46139224653261,0.527758144464379,0,0.170093705276516,1.72732732881711,1.54227252690289,0.541892875087706,4.51520796469368,1.78413391131527,0.831076008928724,1.79099803777743,0,0,0,0,0,0,1.37354197227515,1.32015199872941,0,0,0,0.096670718292122,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636406495851874,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,1.49553699578462,0,0,1.30062222588003,0.28853842595289,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0.201799707191048,3.40676990152261,0,2.15068535015921,1.11838053946208,2.33588798396672,0,0,0,0,0,0,0,0,0.242721043499027,5.79505598242887,2.55722532125772,0,0,0,0,0,0.445234820091624,0,0.211125408127993,0,0,0,0,1.10776324914963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0.91153644677601,0,0,0,0,0,0,0,0,0.332423363800313,0,0,0,0,0,1.47698645169619,0,0,0,0,0,0,1.48260564340311,1.48276726735803,2.29728288912002,0,0,0,0.91227394607833,0.391329237864179,0.242780379534093,0,0,0,0,0.450970258243478,0.103688191397247,0.664653872707185,0.330991955875499,1.2557316736289,0,0.284609546029793,0,0,0,0.261177619741208,0,3.78369271437556,0,0,0,0.0969890164884194,0.794305140223502,0,0.822251547880505,0.596143835108969,0,0,0,0,0.999048047910651,2.3054466744657,1.14536596165916,0,0,0.49701014226173,0,1.35904206073614,1.15063130943567,0.917983958726896,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677386656526276,0,0,0,0.275078873194468,0.415440338029185,0,0,0,0,0,0,0.422401346077626,1.6135860539956,0.191915197319445,0,0,1.77987976358325,0,0,0,2.39460383124975,0,0,0.226624183040251,0,0,0,0,0.342173675768659,0,0.106787412567695,0,0,0,1.97611631897944,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0.553394539744923,1.24980407962107,0,0,8.23430368943601,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0.310525913752519,0,0,0,0,0,0.406870733204662,0,0.859284456339908,0,0,0,0,0,1.26184898228651,5.00811559058989,0,0,0,1.62065732026684,0,0,0,0,0.353378291891762,0,0.168942440653073,1.02496607435179,2.41801239211839,0.303859956177382,0,0,1.0629187225069,0.981392365535065,1.96565909307848,0,0,0.999936979274649,1.49368421571797,1.03328987796489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0.471878893390961,0,0,0,3.4517996303005,0,0,1.41193548092464,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72850981333669,0.342976018874837,0,0,2.00929529502746,0.111231401892069,0,0,0,0,1.94334832096759,1.9110067515482,0,0,0,0,0,1.24329698497822,0.51215543128185,0,0,3.19496401972526,2.72682895229305,0,0.68732060563215,4.03268301363616,5.7332336338646,0,0.294450700845729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39858774219829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.203977659483963,0.26721740526556,2.11358268930143,0,0,0,0,0,0,0,0,0,1.12131862580613,0,0,0,0.342233301085281,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,2.8851164307291 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.246242116153576,0.408001382488506,0.626909442956176,0,0,0,0.916960868975415,1.23150884174919,1.41679406364623,0,0,0,0,0.6024118375565,0,0.619737604642413,1.42169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00269411196656,0,0,0,1.5370958367081,1.30059347559878,0.164437904603676,0.829050053357545,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,0,0.545492241181669,0.573609190778008,0,0.132529768321485,0,0,0.504641701751257,0,0,0,0,0,0,3.54920400119532,3.87744787179634,3.13314338848527,3.52940712743661,3.4860711054785,4.27087114399974,4.71909578560575,3.33576490713088,5.00171304030308,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0.766765358330422,0,0.264145302039678,0,0.144119953416961,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0.15403067420883,2.35304930753057,1.46139224653261,0.527758144464379,0,0.170093705276516,1.72732732881711,1.54227252690289,0.541892875087706,4.51520796469368,1.78413391131527,0.831076008928724,1.79099803777743,0,0,0,0,0,0,1.37354197227515,1.32015199872941,0,0,0,0.096670718292122,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.636406495851874,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,1.49553699578462,0,0,1.30062222588003,0.28853842595289,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0.201799707191048,3.40676990152261,0,2.15068535015921,1.11838053946208,2.33588798396672,0,0,0,0,0,0,0,0,0.242721043499027,5.79505598242887,2.55722532125772,0,0,0,0,0,0.445234820091624,0,0.211125408127993,0,0,0,0,1.10776324914963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0.91153644677601,0,0,0,0,0,0,0,0,0.332423363800313,0,0,0,0,0,1.47698645169619,0,0,0,0,0,0,1.48260564340311,1.48276726735803,2.29728288912002,0,0,0,0.91227394607833,0.391329237864179,0.242780379534093,0,0,0,0,0.450970258243478,0.103688191397247,0.664653872707185,0.330991955875499,1.2557316736289,0,0.284609546029793,0,0,0,0.261177619741208,0,3.78369271437556,0,0,0,0.0969890164884194,0.794305140223502,0,0.822251547880505,0.596143835108969,0,0,0,0,0.999048047910651,2.3054466744657,1.14536596165916,0,0,0.49701014226173,0,1.35904206073614,1.15063130943567,0.917983958726896,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677386656526276,0,0,0,0.275078873194468,0.415440338029185,0,0,0,0,0,0,0.422401346077626,1.6135860539956,0.191915197319445,0,0,1.77987976358325,0,0,0,2.39460383124975,0,0,0.226624183040251,0,0,0,0,0.342173675768659,0,0.106787412567695,0,0,0,1.97611631897944,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0.553394539744923,1.24980407962107,0,0,8.23430368943601,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0.310525913752519,0,0,0,0,0,0.406870733204662,0,0.859284456339908,0,0,0,0,0,1.26184898228651,5.00811559058989,0,0,0,1.62065732026684,0,0,0,0,0.353378291891762,0,0.168942440653073,1.02496607435179,2.41801239211839,0.303859956177382,0,0,1.0629187225069,0.981392365535065,1.96565909307848,0,0,0.999936979274649,1.49368421571797,1.03328987796489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0.471878893390961,0,0,0,3.4517996303005,0,0,1.41193548092464,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72850981333669,0.342976018874837,0,0,2.00929529502746,0.111231401892069,0,0,0,0,1.94334832096759,1.9110067515482,0,0,0,0,0,1.24329698497822,0.51215543128185,0,0,3.19496401972526,2.72682895229305,0,0.68732060563215,4.03268301363616,5.7332336338646,0,0.294450700845729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39858774219829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.203977659483963,0.26721740526556,2.11358268930143,0,0,0,0,0,0,0,0,0,1.12131862580613,0,0,0,0.342233301085281,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,2.8851164307291 | ||
|short_description=p7@CD70 | |||
}} | }} |
Latest revision as of 17:20, 24 September 2015
Short description: | p7@CD70 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CD70_5end |
Coexpression cluster: | C1828_epithelioid_lymphangiectasia_cord_meningioma_adult_renal_serous |
Association with transcript: | -10bp_to_ENST00000245903, NM_001252, uc002mfi.2, uc010xjf.1_5end |
EntrezGene: | CD70 |
HGNC: | 11937 |
UniProt: | P32970Q53XX4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 9.98e-12 | 17 |
kidney epithelial cell | 9.98e-12 | 17 |
epithelial cell of nephron | 3.18e-08 | 15 |
kidney tubule cell | 6.99e-07 | 10 |
nephron tubule epithelial cell | 6.99e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.33e-26 | 9 |
upper respiratory tract | 1.98e-11 | 19 |
kidney | 1.28e-10 | 26 |
kidney mesenchyme | 1.28e-10 | 26 |
upper urinary tract | 1.28e-10 | 26 |
kidney rudiment | 1.28e-10 | 26 |
kidney field | 1.28e-10 | 26 |
cavitated compound organ | 1.59e-08 | 31 |
respiratory primordium | 1.63e-08 | 38 |
endoderm of foregut | 1.63e-08 | 38 |
nephron epithelium | 3.18e-08 | 15 |
renal tubule | 3.18e-08 | 15 |
nephron tubule | 3.18e-08 | 15 |
nephron | 3.18e-08 | 15 |
uriniferous tubule | 3.18e-08 | 15 |
nephrogenic mesenchyme | 3.18e-08 | 15 |
excretory tube | 1.22e-07 | 16 |
kidney epithelium | 1.22e-07 | 16 |
nephron tubule epithelium | 6.99e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.02e-11 | 239 |
cancer | 2.95e-10 | 235 |