FFCP PHASE1:Hg19::chr7:99775580..99775585,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10734 | |EntrezGene=10734 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11356 | |HGNC=11356 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=20bp_to_ENST00000482546_5end | |association_with_transcript=20bp_to_ENST00000482546_5end | ||
|cluster_id=chr7:99775580..99775585,+ | |||
|description=CAGE_peak_9_at_STAG3_5end | |description=CAGE_peak_9_at_STAG3_5end | ||
|id=chr7:99775580..99775585,+ | |id=chr7:99775580..99775585,+ | ||
|ontology_enrichment_celltype=CL:0000039!2.58e-19!7;CL:0000586!2.58e-19!7;CL:0002535!3.76e-18!2;CL:0002573!1.02e-11!2;CL:0002566!2.67e-09!1 | |ontology_enrichment_celltype=CL:0000039!2.58e-19!7;CL:0000586!2.58e-19!7;CL:0002535!3.76e-18!2;CL:0002573!1.02e-11!2;CL:0002566!2.67e-09!1 | ||
|ontology_enrichment_celltype_v019=CL:0002535;8.10e-26;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,9.18e-26,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2355!4.46e-10!1;DOID:178!1.36e-09!1;DOID:326!1.36e-09!1;DOID:3978!1.36e-09!1;DOID:3394!1.36e-09!1;DOID:5844!1.36e-09!1;DOID:1287!2.00e-09!4;DOID:4362!8.53e-08!5 | |ontology_enrichment_disease=DOID:2355!4.46e-10!1;DOID:178!1.36e-09!1;DOID:326!1.36e-09!1;DOID:3978!1.36e-09!1;DOID:3394!1.36e-09!1;DOID:5844!1.36e-09!1;DOID:1287!2.00e-09!4;DOID:4362!8.53e-08!5 | ||
|ontology_enrichment_disease_v019=DOID:2355;5.12e-50;1!DOID:74;8.10e-26;2!DOID:5409;8.82e-14;4!DOID:1287;1.21e-13;4!DOID:4362;3.42e-11;5!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:3905;7.48e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,3.99e-50,1;DOID:74,7.14e-26,2;DOID:5409,8.82e-14,4;DOID:1287,1.13e-13,4;DOID:4362,3.60e-11,5;DOID:1325,1.89e-08,7;DOID:3904,1.89e-08,7;DOID:3905,7.48e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0006955!3.76e-18!2;UBERON:0004801!3.76e-18!2;UBERON:0000473!2.70e-17!8;UBERON:0003135!1.23e-12!11 | |ontology_enrichment_uberon=UBERON:0006955!3.76e-18!2;UBERON:0004801!3.76e-18!2;UBERON:0000473!2.70e-17!8;UBERON:0003135!1.23e-12!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;8.10e-26;2!UBERON:0004801;8.10e-26;2!UBERON:0000002;1.50e-09;6!UBERON:0001560;1.50e-09;6!UBERON:0000473;1.59e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,9.18e-26,2;UBERON:0004801,9.18e-26,2;UBERON:0000002,1.57e-09,6;UBERON:0001560,1.57e-09,6;UBERON:0000473,1.59e-07,8 | |||
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|short_description=p9@STAG3 | |short_description=p9@STAG3 | ||
}} | }} |
Latest revision as of 17:56, 24 September 2015
Short description: | p9@STAG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_STAG3_5end |
Coexpression cluster: | NA |
Association with transcript: | 20bp_to_ENST00000482546_5end |
EntrezGene: | STAG3 |
HGNC: | 11356 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 9.18e-26 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 9.18e-26 | 2 |
cervix epithelium | 9.18e-26 | 2 |
uterine cervix | 1.57e-09 | 6 |
neck of organ | 1.57e-09 | 6 |
testis | 1.59e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
anemia | 3.99e-50 | 1 |
hematopoietic system disease | 7.14e-26 | 2 |
lung small cell carcinoma | 8.82e-14 | 4 |
cardiovascular system disease | 1.13e-13 | 4 |
cervical cancer | 3.60e-11 | 5 |
bronchus cancer | 1.89e-08 | 7 |
bronchogenic carcinoma | 1.89e-08 | 7 |
lung carcinoma | 7.48e-07 | 9 |