FFCP PHASE1:Hg19::chr4:113569337..113569342,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=407028 | |EntrezGene=407028 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=31623 | |HGNC=31623 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=64bp_to_NR_029835,uc011cfz.1_5end | |association_with_transcript=64bp_to_NR_029835,uc011cfz.1_5end | ||
|cluster_id=chr4:113569337..113569342,- | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_1_at_MIR302A_5end | |description=CAGE_peak_1_at_MIR302A_5end | ||
|id=chr4:113569337..113569342,- | |id=chr4:113569337..113569342,- | ||
|ontology_enrichment_celltype=CL:0002322!4.88e-58!5;CL:0000039!8.51e-27!7;CL:0000586!8.51e-27!7;CL:0000540!1.14e-18!6;CL:0000031!1.14e-18!6;CL:0000404!1.14e-18!6;CL:0000047!3.71e-14!8;CL:0000148!3.75e-11!10;CL:0000541!3.75e-11!10;CL:0000147!4.06e-08!14;CL:1000415!5.28e-07!2 | |ontology_enrichment_celltype=CL:0002322!4.88e-58!5;CL:0000039!8.51e-27!7;CL:0000586!8.51e-27!7;CL:0000540!1.14e-18!6;CL:0000031!1.14e-18!6;CL:0000404!1.14e-18!6;CL:0000047!3.71e-14!8;CL:0000148!3.75e-11!10;CL:0000541!3.75e-11!10;CL:0000147!4.06e-08!14;CL:1000415!5.28e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000540;5.61e-43;6!CL:0000404;5.61e-43;6!CL:0002322;2.02e-23;5!CL:0000148;2.98e-12;10!CL:0002319;3.47e-10;25!CL:0000147;4.95e-09;14!CL:0002321;1.71e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.86e-43,6;CL:0000031,4.86e-43,6;CL:0000404,4.86e-43,6;CL:0000047,1.59e-32,8;CL:0002322,2.54e-23,5;CL:0000148,3.34e-12,10;CL:0000541,3.34e-12,10;CL:0000133,6.36e-12,59;CL:0002319,3.36e-10,25;CL:0000221,6.95e-10,72;CL:0000147,5.36e-09,14 | |||
|ontology_enrichment_development_v019=CL:0000031;5.61e-43;6!UBERON:0009117;2.37e-12;10!UBERON:0005564;2.37e-12;10!CL:0000133;1.15e-08;59 | |||
|ontology_enrichment_disease=DOID:3095!2.04e-25!22;DOID:2994!2.04e-25!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!1.70e-23!8;UBERON:0003135!3.49e-17!11;UBERON:0000991!6.56e-14!21;UBERON:0009196!6.56e-14!21;UBERON:0009117!6.56e-14!21;UBERON:0005564!6.56e-14!21;UBERON:0004176!2.82e-13!22;UBERON:0002323!8.70e-09!46;UBERON:0003101!1.02e-08!22;UBERON:0000079!1.02e-08!22;UBERON:0004458!3.17e-08!49 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p1@MIR302A | |short_description=p1@MIR302A | ||
}} | }} |
Latest revision as of 18:05, 24 September 2015
Short description: | p1@MIR302A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIR302A_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 64bp_to_NR_029835, uc011cfz.1_5end |
EntrezGene: | MIR302A |
HGNC: | 31623 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.86e-43 | 6 |
neuroblast | 4.86e-43 | 6 |
electrically signaling cell | 4.86e-43 | 6 |
neuronal stem cell | 1.59e-32 | 8 |
embryonic stem cell | 2.54e-23 | 5 |
melanocyte | 3.34e-12 | 10 |
melanoblast | 3.34e-12 | 10 |
neurectodermal cell | 6.36e-12 | 59 |
neural cell | 3.36e-10 | 25 |
ectodermal cell | 6.95e-10 | 72 |
pigment cell | 5.36e-09 | 14 |