FFCP PHASE1:Hg19::chr12:7245152..7245169,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1246 | |HGNC=1246 | ||
|TSSclassifier=strong | |||
|UniProt=F5H3A3 | |UniProt=F5H3A3 | ||
|association_with_transcript=-16bp_to_ENST00000540610_5end | |association_with_transcript=-16bp_to_ENST00000540610_5end | ||
|cluster_id=chr12:7245152..7245169,- | |||
|coexpression_cluster_id=C3330 | |coexpression_cluster_id=C3330 | ||
|description=CAGE_peak_5_at_C1R_5end | |description=CAGE_peak_5_at_C1R_5end | ||
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|ontology_enrichment_celltype=CL:0000055!1.19e-17!180;CL:0000057!4.66e-11!75;CL:0000183!1.20e-07!59;CL:0000680!1.34e-07!57;CL:0000056!1.34e-07!57;CL:0000355!1.34e-07!57;CL:0000187!4.07e-07!54 | |ontology_enrichment_celltype=CL:0000055!1.19e-17!180;CL:0000057!4.66e-11!75;CL:0000183!1.20e-07!59;CL:0000680!1.34e-07!57;CL:0000056!1.34e-07!57;CL:0000355!1.34e-07!57;CL:0000187!4.07e-07!54 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.21e-10,76 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.37e-16!365;UBERON:0000481!8.89e-15!347;UBERON:0000477!3.07e-09!286;UBERON:0002385!4.43e-08!63;UBERON:0001015!4.43e-08!63;UBERON:0000383!4.43e-08!63;UBERON:0007023!5.73e-08!115;UBERON:0001134!7.79e-08!61;UBERON:0002036!7.79e-08!61;UBERON:0003082!7.79e-08!61;UBERON:0000483!1.02e-07!309;UBERON:0000468!1.20e-07!659;UBERON:0000119!1.23e-07!312;UBERON:0005256!1.55e-07!143;UBERON:0000914!1.87e-07!83;UBERON:0002329!1.87e-07!83;UBERON:0003077!1.87e-07!83;UBERON:0003059!1.87e-07!83;UBERON:0007282!1.87e-07!83;UBERON:0009618!1.87e-07!83;UBERON:0007285!1.87e-07!83;UBERON:0003104!6.80e-07!238;UBERON:0009142!6.80e-07!238;UBERON:0004290!9.04e-07!70 | |ontology_enrichment_uberon=UBERON:0000475!4.37e-16!365;UBERON:0000481!8.89e-15!347;UBERON:0000477!3.07e-09!286;UBERON:0002385!4.43e-08!63;UBERON:0001015!4.43e-08!63;UBERON:0000383!4.43e-08!63;UBERON:0007023!5.73e-08!115;UBERON:0001134!7.79e-08!61;UBERON:0002036!7.79e-08!61;UBERON:0003082!7.79e-08!61;UBERON:0000483!1.02e-07!309;UBERON:0000468!1.20e-07!659;UBERON:0000119!1.23e-07!312;UBERON:0005256!1.55e-07!143;UBERON:0000914!1.87e-07!83;UBERON:0002329!1.87e-07!83;UBERON:0003077!1.87e-07!83;UBERON:0003059!1.87e-07!83;UBERON:0007282!1.87e-07!83;UBERON:0009618!1.87e-07!83;UBERON:0007285!1.87e-07!83;UBERON:0003104!6.80e-07!238;UBERON:0009142!6.80e-07!238;UBERON:0004290!9.04e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.28e-07;25!UBERON:0000948;5.71e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0007100;2.28e-07;25!UBERON:0000948;5.71e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.16e-08,160;UBERON:0009142,1.16e-08,160;UBERON:0007100,1.24e-07,27;UBERON:0007023,1.81e-07,114;UBERON:0000948,3.12e-07,24;UBERON:0005498,3.12e-07,24;UBERON:0004140,3.12e-07,24;UBERON:0009881,3.12e-07,24;UBERON:0004141,3.12e-07,24;UBERON:0003084,3.12e-07,24;UBERON:0007005,3.12e-07,24;UBERON:0004139,3.12e-07,24;UBERON:0004291,3.12e-07,24;UBERON:0005256,8.80e-07,122 | |||
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|phase1_expression=3.08853244759946,4.71021152560163,5.63817616383885,1.0007329835313,1.34088328328186,2.61701557230111,0,5.68547886084148,7.05201196139564,0.491467873003018,0,0,0,7.79728023648294,4.63956326019082,1.34465029290355,1.20538905604795,2.19093027116212,0.975865597581014,3.81675280038043,1.42800483870977,7.20945859399602,2.0036519099174,0.958120975510189,0.627713197974014,0.0764134057479513,0.246301768349837,0.0787107813136792,0.393364276848904,0,0,0,0,0,0,0,3.81680571135301,0,0,0,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,1.32171328579026,0,0.263384084775077,0.196709770113833,0,0.205601498999509,0,0,0,0,0.668462741311041,0,0,0,0.512365278902701,0.260118695119756,0.328875809207352,0.276350017785848,0.289803085735052,0,0.535081656179426,0,0.453237370790265,0.383220493601921,0.34362744548263,0.253019692019503,0.637130828648193,0,0,0,0.255973222308837,0,0,0,0.201606743224732,0,0,12.1903433156981,2.68280343881454,3.45228916977532,1.80719576192283,4.51204119572301,7.24232594804119,6.36228757640879,6.8128881842369,2.83604451492204,0.443458794925128,0.87834785693126,2.81605012320082,3.64295288292542,1.85392221392215,0,0.174129737299267,0.26591592103773,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,1.70843440283719,0,0,0.535798369704479,0.898117490504679,1.0135033243499,0,0,0.183201743930407,0,0,0.436094052142534,7.9515512271251,2.40597972162702,1.72131935057184,9.17877186396204,1.41867352879343,3.36406560085384,0,1.72667283892012,6.22422070799533,2.15537075311501,2.28846664358842,1.66493170409425,1.72852777344,0.70296429550139,1.24864030732128,0.570471821544449,2.69007624993242,0.469737994575059,0.323745888736263,0,1.02077085627447,0.737005903870608,4.02970546585485,2.37600571456411,3.70900393917835,3.64064544775211,3.59309070908119,0.505008341862199,0.875829639103749,0.831192346452549,0.877955241761676,1.83892677479412,3.60571341375832,1.13432183160021,2.69084453533293,6.83383644219416,5.93409323246773,4.20127534518163,3.60683852334536,3.86460810068444,4.46680455195816,7.42615861861571,3.41029518064195,2.52433774244115,12.7949359112796,3.87950536365149,4.61512470271599,1.5112814734146,1.3564847384839,0.193260853163297,1.09098448236334,0.286804595389004,0.609868530647977,0.265059536642971,0.232387885739037,0.310983165046111,0.252320850875628,0,0,7.71889125831462,0,13.4666699129274,8.66255378003503,1.41968160047813,1.85443159085912,1.44606617930089,2.09558548191549,0.871517776369625,0.71181185733329,1.21348177344148,1.96221465125346,0.769494313892781,0,0,3.2925920906512,7.3504355692771,12.6755034821831,5.89696330006576,4.72631925345123,0.441463099414651,0.122988438543114,0.343135620597051,0.109750285408626,0,0.402115889646523,0.185176890317059,0.651616610620649,0,1.44331342025273,1.27523445472584,2.34817388471643,1.44366447761074,0,0.380508304469197,0,0,0.492434012174795,0,0.445893486866185,0,1.00789276919316,0.141775097242386,0.268675568108545,0,0,3.4486426652716,7.48411689112421,0.414656231081544,0,0,0.063497894292169,2.67391897890794,0,3.4214489204541,0.205654985406647,0.300343057843917,0.285826432630578,0.112131084345361,2.61576041299968,0.1466765716419,2.58543431515556,21.4593867511129,2.535908257668,0.797814349754612,0,1.54324424557285,1.41849132023278,1.8649552531127,2.43062589218851,12.4802969240032,9.05564370458846,0.325736184293735,1.42156779497018,0.791951872933429,3.01439377059586,0.871533458600294,2.89921674427965,0,0,0,0.479249710983165,3.44585807502342,2.85273810081437,0.868687840005475,4.52047909610843,2.68591444859843,0.336255431980582,0.197030760201927,0.215627574859517,0,1.52456774533478,1.30139853857622,0,0.335032530668698,1.27587750330633,0,0,0.414415513436035,15.827202431769,15.0051156317903,1.62759014219841,2.70362119990049,1.78428988797162,2.20783381047509,4.4513737697231,8.42649079237613,20.4666753650386,4.1389228517002,0.664225598535437,0.553107505625109,4.95236602468072,3.91602314925481,2.05886054286514,0,0.431428401637234,0.320182673410333,0,0,0.907170879989041,2.72918588600655,3.6830873589135,5.05188169979532,5.12556597022804,3.07024349440022,2.73451665944133,0,1.54209693802656,5.14929003408069,3.94210348866284,3.63478100428535,1.39452454151951,0,0.40101294060657,0,1.95184561879831,0.364182336013434,0.786746489756545,0,0.15403067420883,0,0,0.316654886678627,0,0,0.431831832204279,0,3.25135725052623,4.01351819083883,0,0,0.223874754722178,0,0,2.05160100093111,2.62411716559765,1.95227036798582,3.50339439602256,0.27470839445503,0.41254749960294,0.574265537996172,0,4.82051789532479,5.51023094265095,1.69453478826109,3.37708084397485,0.827019434907183,9.3455613035398,5.36561767482646,1.27839941124151,7.65675506561941,0.165284915360978,0,0.255225424989168,0.4046311234222,0.464845549297286,5.03699754929024,3.485186350803,6.46870518369786,0.532306030317022,0.869932992075073,1.8532421910392,0.14312488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| ||
|short_description=p5@C1R | |short_description=p5@C1R | ||
}} | }} |
Latest revision as of 18:08, 24 September 2015
Short description: | p5@C1R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_C1R_5end |
Coexpression cluster: | C3330_Hepatocyte_liver_Mesenchymal_tenocyte_Synoviocyte_Fibroblast_Nucleus |
Association with transcript: | -16bp_to_ENST00000540610_5end |
EntrezGene: | NA |
HGNC: | 1246 |
UniProt: | F5H3A3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.21e-10 | 76 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 1.16e-08 | 160 |
entire embryonic mesenchyme | 1.16e-08 | 160 |
primary circulatory organ | 1.24e-07 | 27 |
adult organism | 1.81e-07 | 114 |
heart | 3.12e-07 | 24 |
primitive heart tube | 3.12e-07 | 24 |
primary heart field | 3.12e-07 | 24 |
anterior lateral plate mesoderm | 3.12e-07 | 24 |
heart tube | 3.12e-07 | 24 |
heart primordium | 3.12e-07 | 24 |
cardiac mesoderm | 3.12e-07 | 24 |
cardiogenic plate | 3.12e-07 | 24 |
heart rudiment | 3.12e-07 | 24 |
trunk mesenchyme | 8.80e-07 | 122 |