FFCP PHASE1:Hg19::chr12:7245152..7245169,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:7245152..7245169,- to FFCP PHASE1:Hg19::chr12:7245152..7245169,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1246 | |HGNC=1246 | ||
|TSSclassifier=strong | |||
|UniProt=F5H3A3 | |UniProt=F5H3A3 | ||
|association_with_transcript=-16bp_to_ENST00000540610_5end | |||
|cluster_id=chr12:7245152..7245169,- | |||
|coexpression_cluster_id=C3330 | |||
|description=CAGE_peak_5_at_C1R_5end | |||
|id=chr12:7245152..7245169,- | |||
|ontology_enrichment_celltype=CL:0000055!1.19e-17!180;CL:0000057!4.66e-11!75;CL:0000183!1.20e-07!59;CL:0000680!1.34e-07!57;CL:0000056!1.34e-07!57;CL:0000355!1.34e-07!57;CL:0000187!4.07e-07!54 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.21e-10,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.37e-16!365;UBERON:0000481!8.89e-15!347;UBERON:0000477!3.07e-09!286;UBERON:0002385!4.43e-08!63;UBERON:0001015!4.43e-08!63;UBERON:0000383!4.43e-08!63;UBERON:0007023!5.73e-08!115;UBERON:0001134!7.79e-08!61;UBERON:0002036!7.79e-08!61;UBERON:0003082!7.79e-08!61;UBERON:0000483!1.02e-07!309;UBERON:0000468!1.20e-07!659;UBERON:0000119!1.23e-07!312;UBERON:0005256!1.55e-07!143;UBERON:0000914!1.87e-07!83;UBERON:0002329!1.87e-07!83;UBERON:0003077!1.87e-07!83;UBERON:0003059!1.87e-07!83;UBERON:0007282!1.87e-07!83;UBERON:0009618!1.87e-07!83;UBERON:0007285!1.87e-07!83;UBERON:0003104!6.80e-07!238;UBERON:0009142!6.80e-07!238;UBERON:0004290!9.04e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.28e-07;25!UBERON:0000948;5.71e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.16e-08,160;UBERON:0009142,1.16e-08,160;UBERON:0007100,1.24e-07,27;UBERON:0007023,1.81e-07,114;UBERON:0000948,3.12e-07,24;UBERON:0005498,3.12e-07,24;UBERON:0004140,3.12e-07,24;UBERON:0009881,3.12e-07,24;UBERON:0004141,3.12e-07,24;UBERON:0003084,3.12e-07,24;UBERON:0007005,3.12e-07,24;UBERON:0004139,3.12e-07,24;UBERON:0004291,3.12e-07,24;UBERON:0005256,8.80e-07,122 | |||
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| ||
|short_description=p5@C1R | |||
}} | }} |
Latest revision as of 18:08, 24 September 2015
Short description: | p5@C1R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_C1R_5end |
Coexpression cluster: | C3330_Hepatocyte_liver_Mesenchymal_tenocyte_Synoviocyte_Fibroblast_Nucleus |
Association with transcript: | -16bp_to_ENST00000540610_5end |
EntrezGene: | NA |
HGNC: | 1246 |
UniProt: | F5H3A3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.21e-10 | 76 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 1.16e-08 | 160 |
entire embryonic mesenchyme | 1.16e-08 | 160 |
primary circulatory organ | 1.24e-07 | 27 |
adult organism | 1.81e-07 | 114 |
heart | 3.12e-07 | 24 |
primitive heart tube | 3.12e-07 | 24 |
primary heart field | 3.12e-07 | 24 |
anterior lateral plate mesoderm | 3.12e-07 | 24 |
heart tube | 3.12e-07 | 24 |
heart primordium | 3.12e-07 | 24 |
cardiac mesoderm | 3.12e-07 | 24 |
cardiogenic plate | 3.12e-07 | 24 |
heart rudiment | 3.12e-07 | 24 |
trunk mesenchyme | 8.80e-07 | 122 |