FFCP PHASE1:Hg19::chr7:99971821..99971830,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29992 | |EntrezGene=29992 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20396 | |HGNC=20396 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=154bp_to_ENST00000474013_5end | |association_with_transcript=154bp_to_ENST00000474013_5end | ||
|cluster_id=chr7:99971821..99971830,+ | |||
|description=CAGE_peak_10_at_PILRA_5end | |description=CAGE_peak_10_at_PILRA_5end | ||
|id=chr7:99971821..99971830,+ | |id=chr7:99971821..99971830,+ | ||
|ontology_enrichment_celltype=CL:0000738!7.69e-13!140;CL:0002087!6.93e-12!119;CL:0000037!7.04e-10!172;CL:0000566!7.04e-10!172;CL:0002031!9.82e-10!124;CL:0000946!2.40e-09!1;CL:0000786!2.40e-09!1;CL:0000980!2.40e-09!1;CL:0000988!3.64e-09!182;CL:0002032!4.31e-09!165;CL:0000837!4.31e-09!165;CL:0000319!5.31e-09!1;CL:0002194!1.76e-08!63;CL:0000576!1.76e-08!63;CL:0000040!1.76e-08!63;CL:0000559!1.76e-08!63;CL:0000766!1.82e-08!76;CL:0002057!3.24e-08!42;CL:0000945!3.25e-08!24;CL:0000826!3.25e-08!24;CL:0002009!3.50e-08!65;CL:0000860!1.29e-07!45;CL:0000839!1.64e-07!70;CL:0000557!2.18e-07!71 | |ontology_enrichment_celltype=CL:0000738!7.69e-13!140;CL:0002087!6.93e-12!119;CL:0000037!7.04e-10!172;CL:0000566!7.04e-10!172;CL:0002031!9.82e-10!124;CL:0000946!2.40e-09!1;CL:0000786!2.40e-09!1;CL:0000980!2.40e-09!1;CL:0000988!3.64e-09!182;CL:0002032!4.31e-09!165;CL:0000837!4.31e-09!165;CL:0000319!5.31e-09!1;CL:0002194!1.76e-08!63;CL:0000576!1.76e-08!63;CL:0000040!1.76e-08!63;CL:0000559!1.76e-08!63;CL:0000766!1.82e-08!76;CL:0002057!3.24e-08!42;CL:0000945!3.25e-08!24;CL:0000826!3.25e-08!24;CL:0002009!3.50e-08!65;CL:0000860!1.29e-07!45;CL:0000839!1.64e-07!70;CL:0000557!2.18e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.20e-29;24!CL:0000946;2.37e-29;1!CL:0000786;2.37e-29;1!CL:0000235;6.79e-20;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.10e-29,24;CL:0000826,1.10e-29,24;CL:0000946,3.16e-29,1;CL:0000786,3.16e-29,1;CL:0000980,3.16e-29,1;CL:0000235,7.84e-20,6;CL:0000785,2.37e-15,2;CL:0000955,2.37e-15,2;CL:0000818,2.37e-15,2;CL:0000954,2.37e-15,2;CL:0000816,2.37e-15,2;CL:0000838,6.00e-14,52;CL:0000542,1.08e-13,53;CL:0000051,1.08e-13,53;CL:0002087,3.65e-12,115;CL:0002031,1.14e-11,120;CL:0000817,1.09e-10,3;CL:0000738,2.51e-10,136;CL:0002032,9.40e-09,161;CL:0000837,9.40e-09,161;CL:0000037,2.15e-08,168;CL:0000988,5.65e-08,177 | |||
|ontology_enrichment_development_v019=CL:0000954;2.05e-15;2 | |||
|ontology_enrichment_disease=DOID:2355!1.74e-09!1;DOID:3030!5.31e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:2355;8.64e-30;1!DOID:74;1.24e-15;2!DOID:1287;1.76e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,9.99e-30,1;DOID:74,1.33e-15,2;DOID:1287,1.82e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.89e-12!102;UBERON:0003061!4.89e-12!102;UBERON:0002106!8.56e-11!3;UBERON:0004854!8.56e-11!3;UBERON:0009034!8.56e-11!3;UBERON:0002095!8.56e-11!3;UBERON:0004782!8.56e-11!3;UBERON:0003281!8.56e-11!3;UBERON:0009664!8.56e-11!3;UBERON:0002296!8.56e-11!3;UBERON:0005602!8.56e-11!3;UBERON:0001179!8.56e-11!3;UBERON:0006293!8.56e-11!3;UBERON:0002193!9.55e-11!112;UBERON:0001301!7.85e-09!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75750833220288,1.64201178899891,1.65292640758726,0,0,0,0,0,0,0,0,0,0,0,0.434021741431704,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03215996957883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49804183822513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75750833220288,1.64201178899891,1.65292640758726,0,0,0,0,0,0,0,0,0,0,0,0.434021741431704,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03215996957883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49804183822513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p10@PILRA | |short_description=p10@PILRA | ||
}} | }} |
Latest revision as of 18:31, 24 September 2015
Short description: | p10@PILRA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PILRA_5end |
Coexpression cluster: | NA |
Association with transcript: | 154bp_to_ENST00000474013_5end |
EntrezGene: | PILRA |
HGNC: | 20396 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.10e-29 | 24 |
pro-B cell | 1.10e-29 | 24 |
antibody secreting cell | 3.16e-29 | 1 |
plasma cell | 3.16e-29 | 1 |
plasmablast | 3.16e-29 | 1 |
macrophage | 7.84e-20 | 6 |
mature B cell | 2.37e-15 | 2 |
pre-B-II cell | 2.37e-15 | 2 |
transitional stage B cell | 2.37e-15 | 2 |
small pre-B-II cell | 2.37e-15 | 2 |
immature B cell | 2.37e-15 | 2 |
lymphoid lineage restricted progenitor cell | 6.00e-14 | 52 |
lymphocyte | 1.08e-13 | 53 |
common lymphoid progenitor | 1.08e-13 | 53 |
nongranular leukocyte | 3.65e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 1.14e-11 | 120 |
precursor B cell | 1.09e-10 | 3 |
leukocyte | 2.51e-10 | 136 |
hematopoietic oligopotent progenitor cell | 9.40e-09 | 161 |
hematopoietic multipotent progenitor cell | 9.40e-09 | 161 |
hematopoietic stem cell | 2.15e-08 | 168 |
hematopoietic cell | 5.65e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
anemia | 9.99e-30 | 1 |
hematopoietic system disease | 1.33e-15 | 2 |
cardiovascular system disease | 1.82e-08 | 4 |