FFCP PHASE1:Hg19::chr11:82996979..82996994,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:82996979..82996994,-
|short_description=p4@CCDC90B
|description=CAGE_peak_4_at_CCDC90B_5end
|association_with_transcript=12bp_to_ENST00000530253_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=60492 | |EntrezGene=60492 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28108 | |HGNC=28108 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=12bp_to_ENST00000530253_5end | |||
|cluster_id=chr11:82996979..82996994,- | |||
|description=CAGE_peak_4_at_CCDC90B_5end | |||
|id=chr11:82996979..82996994,- | |||
|ontology_enrichment_celltype=CL:0000055!2.13e-08!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.86e-08!94;UBERON:0001016!3.86e-08!94;UBERON:0001017!3.23e-07!82;UBERON:0005743!7.76e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.97e-09,89;UBERON:0001017,1.77e-07,81;UBERON:0004121,7.83e-07,171;UBERON:0000924,7.83e-07,171;UBERON:0006601,7.83e-07,171 | |||
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| ||
|short_description=p4@CCDC90B | |||
}} | }} |
Latest revision as of 18:55, 24 September 2015
Short description: | p4@CCDC90B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CCDC90B_5end |
Coexpression cluster: | NA |
Association with transcript: | 12bp_to_ENST00000530253_5end |
EntrezGene: | CCDC90B |
HGNC: | 28108 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 5.97e-09 | 89 |
central nervous system | 1.77e-07 | 81 |
ectoderm-derived structure | 7.83e-07 | 171 |
ectoderm | 7.83e-07 | 171 |
presumptive ectoderm | 7.83e-07 | 171 |