FFCP PHASE1:Hg19::chr20:22559375..22559383,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=140828 | |EntrezGene=140828 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=16189 | |HGNC=16189 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-95bp_to_ENST00000450346,NR_001558,uc010zsp.1_5end | |||
|cluster_id=chr20:22559375..22559383,- | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_2_at_LINC00261_5end | |||
|id=chr20:22559375..22559383,- | |||
|ontology_enrichment_celltype=CL:0000181!2.57e-24!12;CL:0000417!2.57e-24!12;CL:0000668!2.57e-24!12;CL:0000414!2.57e-24!12;CL:0000412!2.57e-24!12;CL:0000182!2.57e-24!12;CL:0000223!1.80e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.22e-14;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.88e-14,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.75e-07;11!UBERON:0009847;2.12e-07;3!UBERON:0003353;2.12e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009497!7.52e-25!25;UBERON:0000015!7.52e-25!25;UBERON:0002423!7.52e-25!25;UBERON:0006235!7.52e-25!25;UBERON:0004161!7.52e-25!25;UBERON:0008835!6.45e-20!22;UBERON:0003894!6.45e-20!22;UBERON:0009854!5.75e-19!23;UBERON:0002107!6.38e-19!19;UBERON:0006925!6.38e-19!19;UBERON:0008836!6.38e-19!19;UBERON:0007499!2.70e-17!25;UBERON:0009856!1.48e-16!26;UBERON:0005057!1.95e-16!26;UBERON:0003929!3.87e-14!54;UBERON:0005911!8.81e-13!82;UBERON:0002368!1.01e-11!35;UBERON:0000466!1.27e-11!126;UBERON:0004119!1.54e-11!169;UBERON:0000925!1.54e-11!169;UBERON:0006595!1.54e-11!169;UBERON:0001041!1.87e-11!98;UBERON:0004921!3.56e-11!129;UBERON:0004185!3.56e-11!129;UBERON:0000077!3.91e-11!130;UBERON:0002365!5.61e-11!31;UBERON:0002330!5.61e-11!31;UBERON:0000949!1.12e-10!45;UBERON:0001007!1.13e-10!155;UBERON:0001555!1.13e-10!155;UBERON:0007026!1.13e-10!155;UBERON:0005177!3.63e-10!107;UBERON:0005172!5.34e-10!55;UBERON:0005173!5.34e-10!55;UBERON:0002417!8.86e-09!61;UBERON:0000916!8.86e-09!61;UBERON:0009569!3.45e-08!113;UBERON:0000002!9.04e-08!6;UBERON:0001560!9.04e-08!6;UBERON:0002530!1.21e-07!59;UBERON:0001048!1.86e-07!168;UBERON:0002110!5.38e-07!3;UBERON:0006242!5.38e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;3.91e-19;1!UBERON:0006518;3.91e-19;1!UBERON:0008949;3.91e-19;1!UBERON:0000101;3.91e-19;1!UBERON:0002167;3.91e-19;1!UBERON:0002107;1.58e-15;19!UBERON:0006925;1.58e-15;19!UBERON:0002423;6.86e-12;25!UBERON:0002365;5.79e-10;31!UBERON:0002330;5.79e-10;31!UBERON:0000949;7.14e-09;43!UBERON:0002368;4.13e-08;33!UBERON:0005172;5.38e-07;52!UBERON:0005173;5.38e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,3.91e-19,1;UBERON:0006518,3.91e-19,1;UBERON:0008949,3.91e-19,1;UBERON:0000101,3.91e-19,1;UBERON:0002167,3.91e-19,1;UBERON:0002107,1.50e-15,19;UBERON:0006925,1.50e-15,19;UBERON:0008836,1.50e-15,19;UBERON:0008835,1.75e-13,22;UBERON:0003894,1.75e-13,22;UBERON:0009854,6.50e-13,23;UBERON:0007499,6.57e-12,25;UBERON:0009497,6.57e-12,25;UBERON:0000015,6.57e-12,25;UBERON:0002423,6.57e-12,25;UBERON:0006235,6.57e-12,25;UBERON:0004161,6.57e-12,25;UBERON:0009856,1.83e-11,26;UBERON:0000949,3.87e-10,45;UBERON:0002365,1.15e-09,31;UBERON:0002330,1.15e-09,31;UBERON:0002368,1.35e-08,35;UBERON:0003929,1.83e-08,54;UBERON:0005172,1.93e-08,54;UBERON:0005173,1.93e-08,54;UBERON:0005177,2.00e-08,101;UBERON:0005911,8.81e-08,82;UBERON:0002530,9.54e-08,59;UBERON:0002417,1.34e-07,60;UBERON:0000916,1.34e-07,60 | |||
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|short_description=p2@LINC00261 | |||
}} | }} |
Latest revision as of 18:57, 24 September 2015
Short description: | p2@LINC00261 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LINC00261_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | -95bp_to_ENST00000450346, NR_001558, uc010zsp.1_5end |
EntrezGene: | LINC00261 |
HGNC: | 16189 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.88e-14 | 12 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 3.91e-19 | 1 |
right lung lobe | 3.91e-19 | 1 |
lower lobe of lung | 3.91e-19 | 1 |
lobe of lung | 3.91e-19 | 1 |
right lung | 3.91e-19 | 1 |
liver | 1.50e-15 | 19 |
digestive gland | 1.50e-15 | 19 |
liver bud | 1.50e-15 | 19 |
hepatic diverticulum | 1.75e-13 | 22 |
liver primordium | 1.75e-13 | 22 |
digestive tract diverticulum | 6.50e-13 | 23 |
epithelial sac | 6.57e-12 | 25 |
epithelium of foregut-midgut junction | 6.57e-12 | 25 |
anatomical boundary | 6.57e-12 | 25 |
hepatobiliary system | 6.57e-12 | 25 |
foregut-midgut junction | 6.57e-12 | 25 |
septum transversum | 6.57e-12 | 25 |
sac | 1.83e-11 | 26 |
endocrine system | 3.87e-10 | 45 |
exocrine gland | 1.15e-09 | 31 |
exocrine system | 1.15e-09 | 31 |
endocrine gland | 1.35e-08 | 35 |
gut epithelium | 1.83e-08 | 54 |
abdomen element | 1.93e-08 | 54 |
abdominal segment element | 1.93e-08 | 54 |
trunk region element | 2.00e-08 | 101 |
endo-epithelium | 8.81e-08 | 82 |
gland | 9.54e-08 | 59 |
abdominal segment of trunk | 1.34e-07 | 60 |
abdomen | 1.34e-07 | 60 |