FFCP PHASE1:Hg19::chr11:830434..830484,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283229 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28703 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000526531_5end | |||
|cluster_id=chr11:830434..830484,+ | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_1_at_EFCAB4A_5end | |||
|id=chr11:830434..830484,+ | |||
|ontology_enrichment_celltype=CL:0002321!7.47e-16!248;CL:0000220!4.14e-15!246;CL:0000066!7.15e-12!254;CL:1000497!6.41e-11!18;CL:0002518!6.41e-11!18;CL:1000449!7.06e-10!16;CL:0000055!9.50e-09!180;CL:0000222!2.33e-08!119;CL:1000507!4.52e-08!12;CL:1000494!4.52e-08!12;CL:0002681!7.62e-08!13;CL:0002584!7.62e-08!13;CL:0000325!2.32e-07!39;CL:0002078!5.46e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:1000497;4.57e-13;17!CL:0002518;4.57e-13;17!CL:1000449;7.53e-12;15!CL:0002681;2.31e-09;12!CL:0002584;2.31e-09;12!CL:1000507;3.06e-09;10!CL:1000494;3.06e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.16e-15,253;CL:0002321,8.34e-15,250;CL:1000497,5.07e-13,17;CL:0002518,5.07e-13,17;CL:1000449,9.09e-12,15;CL:0002681,2.71e-09,12;CL:0002584,2.71e-09,12;CL:1000507,3.25e-09,10;CL:1000494,3.25e-09,10;CL:0002078,1.59e-08,45;CL:0000222,1.39e-07,121;CL:0000115,1.85e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.18e-20!312;UBERON:0000483!2.15e-19!309;UBERON:0000475!1.33e-14!365;UBERON:0000481!3.79e-12!347;UBERON:0000468!5.25e-12!659;UBERON:0000477!1.52e-10!286;UBERON:0000922!1.71e-10!612;UBERON:0006555!5.19e-10!17;UBERON:0005103!5.19e-10!17;UBERON:0000083!5.19e-10!17;UBERON:0009201!5.19e-10!17;UBERON:0004819!5.19e-10!17;UBERON:0006553!5.19e-10!17;UBERON:0003074!5.19e-10!17;UBERON:0003060!5.19e-10!17;UBERON:0004211!7.06e-10!16;UBERON:0001285!7.06e-10!16;UBERON:0007684!7.06e-10!16;UBERON:0003220!7.06e-10!16;UBERON:0004208!7.06e-10!16;UBERON:0000080!1.10e-09!18;UBERON:0002120!1.10e-09!18;UBERON:0004875!1.10e-09!18;UBERON:0005721!1.10e-09!18;UBERON:0005754!1.10e-09!18;UBERON:0007297!1.10e-09!18;UBERON:0004111!2.20e-09!241;UBERON:0000490!5.44e-09!138;UBERON:0004876!7.24e-09!20;UBERON:0005256!8.98e-09!143;UBERON:0003914!9.72e-09!118;UBERON:0000970!1.03e-08!20;UBERON:0000020!1.29e-08!23;UBERON:0002050!1.74e-08!605;UBERON:0005423!1.74e-08!605;UBERON:0000923!1.92e-08!604;UBERON:0005291!1.92e-08!604;UBERON:0006598!1.92e-08!604;UBERON:0002532!1.92e-08!604;UBERON:0000064!2.65e-08!219;UBERON:0000019!2.69e-08!19;UBERON:0000047!2.69e-08!19;UBERON:0004088!2.69e-08!19;UBERON:0003072!2.69e-08!19;UBERON:0003071!2.69e-08!19;UBERON:0004128!2.69e-08!19;UBERON:0000025!3.61e-08!194;UBERON:0000924!4.10e-08!173;UBERON:0006601!4.10e-08!173;UBERON:0009773!4.52e-08!12;UBERON:0001231!4.52e-08!12;UBERON:0004810!4.52e-08!12;UBERON:0000480!4.66e-08!626;UBERON:0000467!4.72e-08!625;UBERON:0001225!7.62e-08!13;UBERON:0008987!7.62e-08!13;UBERON:0001456!7.85e-08!21;UBERON:0003887!8.59e-08!21;UBERON:0002104!8.68e-08!21;UBERON:0001032!8.97e-08!24;UBERON:0004456!8.97e-08!24;UBERON:0002100!1.22e-07!216;UBERON:0002049!1.24e-07!79;UBERON:0007798!1.24e-07!79;UBERON:0002113!1.38e-07!27;UBERON:0003918!1.38e-07!27;UBERON:0005095!1.38e-07!27;UBERON:0007687!1.38e-07!27;UBERON:0000058!1.85e-07!26;UBERON:0004121!1.89e-07!169;UBERON:0007625!2.79e-07!11;UBERON:0009569!4.30e-07!113;UBERON:0006554!5.72e-07!44;UBERON:0001008!7.26e-07!45;UBERON:0001444!8.65e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;7.53e-12;15!UBERON:0004819;7.53e-12;15!UBERON:0001285;7.53e-12;15!UBERON:0007684;7.53e-12;15!UBERON:0000970;1.66e-10;20!UBERON:0000019;4.87e-10;19!UBERON:0000047;4.87e-10;19!UBERON:0004088;4.87e-10;19!UBERON:0010230;4.87e-10;19!UBERON:0000020;6.27e-10;23!UBERON:0001456;1.01e-09;21!UBERON:0002104;1.25e-09;21!UBERON:0001225;2.31e-09;12!UBERON:0008987;2.31e-09;12!UBERON:0002113;2.77e-09;24!UBERON:0011143;2.77e-09;24!UBERON:0004211;3.06e-09;10!UBERON:0009773;3.06e-09;10!UBERON:0001231;3.06e-09;10!UBERON:0004810;3.06e-09;10!UBERON:0001032;3.60e-09;24!UBERON:0004456;3.60e-09;24!UBERON:0006554;4.25e-09;30!UBERON:0001008;4.25e-09;30!UBERON:0000353;5.46e-09;15!UBERON:0007625;1.49e-08;11!UBERON:0006876;7.75e-08;11!UBERON:0000490;2.19e-07;33!UBERON:0000489;6.08e-07;29!UBERON:0001801;7.90e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,7.38e-16,309;UBERON:0000483,1.21e-14,306;UBERON:0006555,6.56e-12,16;UBERON:0004819,6.56e-12,16;UBERON:0004211,9.09e-12,15;UBERON:0009773,9.09e-12,15;UBERON:0001231,9.09e-12,15;UBERON:0001285,9.09e-12,15;UBERON:0007684,9.09e-12,15;UBERON:0004208,9.09e-12,15;UBERON:0000970,1.30e-09,21;UBERON:0002104,1.30e-09,21;UBERON:0001225,2.71e-09,12;UBERON:0008987,2.71e-09,12;UBERON:0004810,3.25e-09,10;UBERON:0000019,4.09e-09,20;UBERON:0000047,4.09e-09,20;UBERON:0010312,4.09e-09,20;UBERON:0004088,4.09e-09,20;UBERON:0010230,4.09e-09,20;UBERON:0003072,4.09e-09,20;UBERON:0004128,4.09e-09,20;UBERON:0003071,4.09e-09,20;UBERON:0000020,5.17e-09,24;UBERON:0001032,5.17e-09,24;UBERON:0004456,5.17e-09,24;UBERON:0000353,6.37e-09,15;UBERON:0001456,7.05e-09,22;UBERON:0002113,7.99e-09,26;UBERON:0003918,7.99e-09,26;UBERON:0011143,7.99e-09,26;UBERON:0005095,7.99e-09,26;UBERON:0007687,7.99e-09,26;UBERON:0007625,1.80e-08,11;UBERON:0003104,3.60e-08,160;UBERON:0009142,3.60e-08,160;UBERON:0000922,7.05e-08,592;UBERON:0006876,8.73e-08,11;UBERON:0005085,3.87e-07,31;UBERON:0000490,4.06e-07,148;UBERON:0009569,7.13e-07,112;UBERON:0001801,7.77e-07,14;UBERON:0003914,9.20e-07,117 | |||
|phase1_expression=0.181678379270557,2.99740733447376,0.563817616383885,1.0007329835313,0.893922188854576,0,7.59899634504932,1.89515962028049,9.66386824339403,6.63481628554074,31.4010525587592,4.58726881473362,3.16520373874144,5.07442047136191,3.97676850873499,0.672325146451775,0,0.730310090387373,0,12.0658636915252,29.9881016129052,3.13454721478088,2.28988789704845,5.33810257784248,2.88748071068046,0,0,0,0,0,0,2.75826367343678,1.204823675113,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0.251248665256743,0.521482918420201,0.217188844705117,0,0,0.316462387440884,0.422510572623884,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,1.34140171940727,0.895037932904712,3.2529523714611,0,2.89693037921647,1.5905718941022,1.94653948121054,14.6528966604305,21.2860221564061,18.9723137097152,0.72038491523742,2.18577172975525,1.85392221392215,0,0,0,0,0.571994910780128,0,1.39133685156694,0,4.16568601929113,0.56530794192401,1.25849830862972,8.52865930014209,0.417989933073621,3.6178346283706,1.42306505074684,2.34304428935269,1.61131726843659,4.56163263431108,6.83373761134875,2.20597848207521,3.24056779152704,4.46498641420399,2.2452937262617,3.37834441449967,4.5994991239765,5.69559395740877,2.38162267109529,0,0,3.05265836499774,0,0.25326102332916,0.926864265692532,1.14734648299525,1.77334191099179,3.36406560085384,0,0.49333509683432,1.55605517699883,0.67355336034844,0.817309515567294,3.32986340818849,4.60940739583999,0.468642863667593,0,1.1409436430889,1.04614076386261,0.23486899728753,0.161872944368132,0.842704840213491,1.02077085627447,3.4393608847295,1.65321249881225,0,0,0,0.718618141816238,0.336672227908132,1.25118519871964,1.10825646193673,2.19488810440419,0.919463387397059,0.901428353439581,0.453728732640084,0.89694817844431,0.640672166455702,0.423863802319124,0.900273288253207,0.824420233907511,0.257640540045629,0.744467425326359,1.0126579934476,1.36411807225678,1.51460264546469,0.552299391853796,1.93975268182574,2.4850671476163,1.10827308050404,1.52604533079439,0.57978255948989,1.09098448236334,1.43402297694502,11.7094757884412,8.74696470921803,11.3870064012128,5.49403591581463,7.31730467539322,6.56959246336494,6.25798129319264,1.92972281457866,0,0,2.16563844500876,0,0,0,0,0,0,0,0.196221465125346,0,22.1446636387394,1.40241773803446,2.057870056657,1.47008711385542,0,0,0.590789906681404,0,4.18160691046586,42.0341135231388,1.64625428112938,1.1240175325762,0.603173834469785,3.33318402570707,0,3.11980435583874,12.9898207822746,17.3895607462615,2.93521735589554,1.01056513432752,0.925971025153221,2.85381228351897,0,0,0.246217006087397,0.234004265139238,0.148631162288728,2.81201501960331,0.16798212819886,0.567100388969546,0,0,0.766765358330422,0,0,0.207328115540772,0,0,0.190493682876507,0.763976851116555,0,1.71072446022705,1.43958489784653,9.61097785100536,0,13.3435990370979,6.5394010324992,30.4353886156943,0.904902010304444,7.15312891703765,0,0.797814349754612,0,9.51667284769926,8.5109479213967,10.9233093396601,0.714889968290738,1.08524321078289,4.11620168390384,0,1.06617584622764,0,1.50719688529793,3.48613383440118,1.89948683245908,0,0,0,1.4377491329495,3.44585807502342,1.42636905040718,0.723906533337896,3.49309748335652,2.86497541183833,0,0,0,0,3.30323011489202,2.60279707715243,0,0.837581326671744,0,0,0,0,3.43536176813592,7.00238729483548,2.71265023699736,1.03985430765404,0,0.157702415033935,0.937131319941706,2.70851489754947,4.5481500811197,1.03473071292505,1.99267679560631,5.34670588770939,0.521301686808497,97.3131752589821,20.9317488524622,0,0,0,0.909382714338778,4.99306318531491,0.907170879989041,0.744323423456331,1.07423381301644,1.68396056659844,0.640695746278505,1.02341449813341,0.160853921143607,2.96836132889982,0.462629081407967,0.355123450626254,1.72467027628999,1.03850885836724,1.39452454151951,7.6141453242722,1.60405176242628,0.460404944679482,0.459257792658427,0,0.786746489756545,11.2799903226853,14.7099293869432,53.3357843040262,23.3822759445217,22.4824969541825,4.54933536283586,4.25234263191289,2.37507507712353,13.880452742126,24.1142329414029,39.6334921345334,10.4499271948466,7.47968408035852,11.6414872455533,0,0,40.2626696432731,6.23227826829441,17.5704333118724,0.309123034943167,0,0,1.72279661398852,0.650060246036521,0,9.28038895604371,3.85121542786611,3.68408819342711,1.37836572484531,1.50388342815583,1.45016693914229,1.96021243057032,10.1496520637281,0,0.960950336825531,3.06270509987002,1.71968227454435,1.85938219718914,1.25924938732256,1.3940745403212,0.924100740528266,1.06461206063404,0.869932992075073,4.07713282028624,1.00187420719394,18.2357600986237,3.48017367190598,3.0500831027812,5.11795582622668,1.28381696410176,1.27281299170375,3.92474320099615,0.899362287916574,0,0.471249609382746,0.606547444719948,0,0.842516912477962,3.41343617362713,0.731140468893853,3.16950440270266,0.682499557039929,0.707027159768564,3.39024349860728,5.51365343546124,0,0.876901770507525,19.6783681650674,6.55894752046633,0.202910376962704,1.8589409885985,1.40847801266121,2.29458163526482,0.982490410131212,0.7133421029625,4.96665489698837,2.53329162357197,1.64647446479951,3.79473173765715,4.19921664293979,0.288666338176536,4.02181365321472,2.17781969722645,0.659006605437454,2.15252686335615,6.73885902670502,2.21715076768338,1.37834040124176,0,0,0,0,0,0,0,0,17.6259717360331,0,21.0734585743687,1.85803175125719,0,0,0.318852545457645,0,0,0,0.973865820823666,0,0,0,0,0.677167111206413,0,0,0,0,0,0,0,0,0,0,0,0,0,14.0355405306165,2.3441308683503,0,0,1.70481688083848,2.62618933211459,1.18785872333055,1.53580351049616,0.994147647766298,1.26602474769461,1.55832187032068,0,9.07839254950372,0.796991953004279,1.10513566212459,10.077309914171,0,0,0.622079175323615,11.4132805957105,0,0,0.197286811273867,0,0,0,0.74214478529481,1.99613798001194,0,567.178099975329,0.724999575434793,5.34829206941848,11.1871606128817,0,16.8924252888318,0.291604613383254,0,0,1.80894657938112,3.05163472634166,4.31259113731776,4.72876190325676,2.85201016300164,0,0,1.30815439456455,0,0,0.359030577639089,0.54323685961004,0.957003479195758,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0,0,4.66465135732005,9.52110014865201,1.99052386215701,0.707660516026713,1.22206028986725,0,0,0,0.404406797884062,2.40773294189637,0.702793337176017,0,0.586993856796269,0,2.76209081994573,0,0,0.884612114798832,0,0,0,0,0,0,13.3766486634003,2.35746944122336,0,0.391969589657511,0.435296032902013,2.27144668714639,7.22341336380789,0,0,0,0.581934098930517,9.88468618944803,4.97157629717171,0,0.19871461170299,0.633107959558787,0,9.69921725043558,2.13452994739353,0,0,0.114536596165916,0.343189995723929,1.1524383839052,13.1707687699358,1.88555227693436,0.135904206073614,0.104602846312333,0,0.288950589901519,1.20084057741958,0.273810757783986,0,0,0,0.558564802544508,0.687481272035051,0,0.798716001995964,0.858452096273142,0.89268582976749,0.604651252380536,0,0,8.42980050687293,7.82950654621081,6.94256501698104,1.67326718575073,0,0,1.90684768556206,7.23389168092586,13.6164042231261,13.2940908169339,0,0,0.607495566580247,0,0.630445658393585,2.7276385830199,5.28001682597032,0,4.60596473566669,3.57347663186684,0,0,0,2.5926644736038,1.30634944043764,1.19730191562487,0,4.94125263177723,0,0.439656701034247,0,1.55139547633861,1.19009341568421,0.171086837884329,0,0.320362237703084,0.943225830597996,0,0.992332043623902,0.592834895693833,0,1.91502377331055,7.07223144380316,9.77690586688531,7.65863941908654,0.983617892129413,0,0.886068179966986,0.610131324509816,0.250381861413,0,0.887432412294818,0.558867626472451,5.25724812757677,36.7442399408593,0.151649117541648,1.14186133417987,0.705797459094515,3.74667924645505,8.26049863081703,0.149254802886874,0,1.10961172300523,14.773434411457,1.25783950876288,3.55924488638614,0,1.81477108515887,1.39893480524502,0.443565449968902,0.955780602982214,0.449803112163605,0.621051827505038,0.414706207840855,2.65841714557995,1.04349012362347,1.95334891696384,5.71207818253193,1.62748293281865,0,1.07410557042488,1.85613503951397,0.796191777397232,1.60011105865261,1.71697852591396,0.673498977531838,0,0,0.214441591374926,0.260994291965212,0,0.926089897295336,0.244736704506468,0,0.308801447160972,0,15.3719556972917,0,4.73038833828603,0,0,0,1.10606748921385,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0.559518030877778,2.48830904013189,0.76736622782191,0,4.08891448825331,0.982886743728125,6.28010360829893,0.425149840203366,2.85052257795705,4.46915934378595,0.318004350653419,1.02520268501629,4.80342448971282,0,0,1.22035527683273,0,0.478901577171454,0.41023272848151,0,0.276629009856872,0.161475645631851,0,0.0981477185010256,8.37585035768957,3.4851433719119,1.03973099535304,0,0.690359926060101,0,1.50420656698514,1.41193548092464,0,0,0,0,0.405225507710368,0,0.206686796501184,0.317079050969534,0,6.57909320228619,2.97726707033577,15.1249270149274,1.14986184875636,4.82131652290458,1.3451348888753,0.606965604236632,1.13831095675649,0.354809480650555,0.691403925334676,2.05785611324902,1.97112225632812,0.789273282754189,15.1288116331479,0.111231401892069,1.56986185701028,1.57115589916002,3.92381028639305,0.913158720509496,4.96633459802829,15.2880540123856,3.07349139959622,23.5440281481763,12.2053496636532,2.26015753993353,0,0.62164849248911,0,0,5.16272830584333,1.41998400876678,0.511280428554946,0.846774100381858,7.3314197934096,0,0,2.57267493134922,0.98150233615243,3.41370189950354,0,0.410651227424988,4.6392577253528,2.91426595835484,0.935757853848423,6.76432635548652,0,1.24240690242856,14.5121482103966,1.66059127923341,0.385870790539723,3.0598338470554,0,0.245148321753905,0,0.588925401344836,0.297046400327086,1.2679671827502,0,0.375935671919414,0.580120991762195,0,1.42843150884526,0,0.561689566824178,0.730336388246517,4.12856355064087,1.14671666521161,7.57303498527286,0.611923411718232,0,1.0580536810308,2.97596014533401,0.924351257262837,1.29787968637137,5.04665699340316,2.95017044301978,0.506794004045748,1.22386595690378,1.87052183685892,6.80022256557852,1.75495277504663,0.454672189309436,1.33982065078089,0,0.517164979309476,0.852935927603924,2.85677317756488,0,0.434523000071005,4.59740636580515,0.572824424503484,0.808468755832877,0.870866991587845,2.39563310759697,0.740872583160463,1.2192774916755,1.99596213927608,0,1.49418284228802,0,0,0,0.611207220914332,0.813792356631477,0.665756774185513,1.00636896795513,0 | |||
|short_description=p1@EFCAB4A | |||
}} |
Latest revision as of 19:03, 24 September 2015
Short description: | p1@EFCAB4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EFCAB4A_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | 0bp_to_ENST00000526531_5end |
EntrezGene: | EFCAB4A |
HGNC: | 28703 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.16e-15 | 253 |
embryonic cell | 8.34e-15 | 250 |
kidney cell | 5.07e-13 | 17 |
kidney epithelial cell | 5.07e-13 | 17 |
epithelial cell of nephron | 9.09e-12 | 15 |
kidney cortical cell | 2.71e-09 | 12 |
renal cortical epithelial cell | 2.71e-09 | 12 |
kidney tubule cell | 3.25e-09 | 10 |
nephron tubule epithelial cell | 3.25e-09 | 10 |
meso-epithelial cell | 1.59e-08 | 45 |
mesodermal cell | 1.39e-07 | 121 |
endothelial cell | 1.85e-07 | 36 |