FFCP PHASE1:Hg19::chr20:22566100..22566105,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3170 | |EntrezGene=3170 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5022 | |HGNC=5022 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y261 | |UniProt=Q9Y261 | ||
|association_with_transcript=0bp_to_NM_153675,uc002wsn.2_5end | |||
|cluster_id=chr20:22566100..22566105,- | |||
|coexpression_cluster_id=C703 | |||
|description=CAGE_peak_9_at_FOXA2_5end | |||
|id=chr20:22566100..22566105,- | |||
|ontology_enrichment_celltype=CL:0000181!1.95e-16!12;CL:0000417!1.95e-16!12;CL:0000668!1.95e-16!12;CL:0000414!1.95e-16!12;CL:0000412!1.95e-16!12;CL:0000182!1.95e-16!12;CL:0000223!2.48e-09!59;CL:0002379!5.31e-09!1 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.60e-33;12!CL:0002567;1.35e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.30e-33,12;CL:0002567,1.01e-09,3;CL:0000223,3.21e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.82e-36;11!UBERON:0009497;8.43e-31;13!UBERON:0001041;1.15e-13;30!UBERON:0003104;4.13e-13;31 | |||
|ontology_enrichment_disease=DOID:0050619!4.19e-09!1;DOID:1357!4.19e-09!1;DOID:3620!5.31e-09!1;DOID:3565!5.31e-09!1;DOID:3111!6.22e-09!1;DOID:3603!6.22e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0008835!6.48e-22!22;UBERON:0003894!6.48e-22!22;UBERON:0009854!6.46e-21!23;UBERON:0002107!8.32e-20!19;UBERON:0006925!8.32e-20!19;UBERON:0008836!8.32e-20!19;UBERON:0007499!3.70e-19!25;UBERON:0009497!3.70e-19!25;UBERON:0000015!3.70e-19!25;UBERON:0002423!3.70e-19!25;UBERON:0006235!3.70e-19!25;UBERON:0004161!3.70e-19!25;UBERON:0009856!2.22e-18!26;UBERON:0005057!2.92e-14!26;UBERON:0002365!7.87e-12!31;UBERON:0002330!7.87e-12!31;UBERON:0005911!1.62e-11!82;UBERON:0000466!5.04e-11!126;UBERON:0001041!5.47e-11!98;UBERON:0002368!2.20e-10!35;UBERON:0001764!4.19e-09!1;UBERON:0001825!4.19e-09!1;UBERON:0004913!9.17e-09!1;UBERON:0003703!9.17e-09!1;UBERON:0001174!9.17e-09!1;UBERON:0004914!9.17e-09!1;UBERON:0003929!2.79e-08!54;UBERON:0000949!6.84e-08!45;UBERON:0000077!1.03e-07!130;UBERON:0004921!1.03e-07!129;UBERON:0004185!1.03e-07!129;UBERON:0004119!1.88e-07!169;UBERON:0000925!1.88e-07!169;UBERON:0006595!1.88e-07!169;UBERON:0005177!6.01e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.04e-46;19!UBERON:0006925;1.04e-46;19!UBERON:0002423;1.36e-35;25!UBERON:0002365;7.83e-29;31!UBERON:0002330;7.83e-29;31!UBERON:0002368;5.77e-23;33!UBERON:0000949;4.33e-18;43!UBERON:0005172;2.89e-12;52!UBERON:0005173;2.89e-12;52!UBERON:0002417;9.21e-11;58!UBERON:0000916;9.21e-11;58!UBERON:0002530;2.85e-10;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.22e-46,19;UBERON:0006925,1.22e-46,19;UBERON:0008836,1.22e-46,19;UBERON:0008835,2.46e-40,22;UBERON:0003894,2.46e-40,22;UBERON:0009854,1.34e-38,23;UBERON:0007499,1.53e-35,25;UBERON:0009497,1.53e-35,25;UBERON:0000015,1.53e-35,25;UBERON:0002423,1.53e-35,25;UBERON:0006235,1.53e-35,25;UBERON:0004161,1.53e-35,25;UBERON:0009856,3.46e-34,26;UBERON:0002365,9.98e-29,31;UBERON:0002330,9.98e-29,31;UBERON:0002368,1.77e-25,35;UBERON:0000949,7.13e-20,45;UBERON:0003929,1.35e-16,54;UBERON:0005172,1.35e-16,54;UBERON:0005173,1.35e-16,54;UBERON:0002530,3.33e-15,59;UBERON:0002417,5.94e-15,60;UBERON:0000916,5.94e-15,60;UBERON:0005911,5.67e-11,82;UBERON:0001041,2.40e-10,87;UBERON:0005177,6.42e-09,101;UBERON:0009569,4.81e-08,112;UBERON:0003914,1.06e-07,117;UBERON:0004921,1.43e-07,118;UBERON:0005256,2.20e-07,122 | |||
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|short_description=p9@FOXA2 | |||
}} | }} |
Latest revision as of 19:05, 24 September 2015
Short description: | p9@FOXA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_FOXA2_5end |
Coexpression cluster: | C703_liver_hepatocellular_Hepatocyte_hepatoblastoma_colon_gastrointestinal_mature |
Association with transcript: | 0bp_to_NM_153675, uc002wsn.2_5end |
EntrezGene: | FOXA2 |
HGNC: | 5022 |
UniProt: | Q9Y261 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.30e-33 | 12 |
light melanocyte | 1.01e-09 | 3 |
endodermal cell | 3.21e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 1.22e-46 | 19 |
digestive gland | 1.22e-46 | 19 |
liver bud | 1.22e-46 | 19 |
hepatic diverticulum | 2.46e-40 | 22 |
liver primordium | 2.46e-40 | 22 |
digestive tract diverticulum | 1.34e-38 | 23 |
epithelial sac | 1.53e-35 | 25 |
epithelium of foregut-midgut junction | 1.53e-35 | 25 |
anatomical boundary | 1.53e-35 | 25 |
hepatobiliary system | 1.53e-35 | 25 |
foregut-midgut junction | 1.53e-35 | 25 |
septum transversum | 1.53e-35 | 25 |
sac | 3.46e-34 | 26 |
exocrine gland | 9.98e-29 | 31 |
exocrine system | 9.98e-29 | 31 |
endocrine gland | 1.77e-25 | 35 |
endocrine system | 7.13e-20 | 45 |
gut epithelium | 1.35e-16 | 54 |
abdomen element | 1.35e-16 | 54 |
abdominal segment element | 1.35e-16 | 54 |
gland | 3.33e-15 | 59 |
abdominal segment of trunk | 5.94e-15 | 60 |
abdomen | 5.94e-15 | 60 |
endo-epithelium | 5.67e-11 | 82 |
foregut | 2.40e-10 | 87 |
trunk region element | 6.42e-09 | 101 |
subdivision of trunk | 4.81e-08 | 112 |
epithelial tube | 1.06e-07 | 117 |
subdivision of digestive tract | 1.43e-07 | 118 |
trunk mesenchyme | 2.20e-07 | 122 |