FFCP PHASE1:Hg19::chr6:133008544..133008545,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8876 | |EntrezGene=8876 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=12705 | |HGNC=12705 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-27bp_to_uc003qdn.2_5end | |association_with_transcript=-27bp_to_uc003qdn.2_5end | ||
|cluster_id=chr6:133008544..133008545,- | |||
|description=CAGE_peak_7_at_VNN1_5end | |description=CAGE_peak_7_at_VNN1_5end | ||
|id=chr6:133008544..133008545,- | |id=chr6:133008544..133008545,- | ||
|ontology_enrichment_celltype=CL:0002619!7.01e-16!3;CL:0002621!5.45e-08!3;CL:0000066!1.97e-07!254 | |ontology_enrichment_celltype=CL:0002619!7.01e-16!3;CL:0002621!5.45e-08!3;CL:0000066!1.97e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002166;1.60e-14;3!CL:0002621;1.60e-14;3!CL:0000083;3.10e-11;4!CL:0000235;6.33e-08;6 | |ontology_enrichment_celltype_v019=CL:0002166;1.60e-14;3!CL:0002621;1.60e-14;3!CL:0000083;3.10e-11;4!CL:0000235;6.33e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002166,1.22e-14,3;CL:0002621,1.60e-14,3;CL:0000083,2.80e-11,4;CL:0000235,6.78e-08,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!5.65e-09!14 | |ontology_enrichment_disease=DOID:2394!5.65e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:4929;4.66e-21;2!DOID:1793;3.10e-11;4!DOID:170;6.33e-08;6 | |ontology_enrichment_disease_v019=DOID:4929;4.66e-21;2!DOID:1793;3.10e-11;4!DOID:170;6.33e-08;6 | ||
|ontology_enrichment_disease_v019_2=DOID:4929,3.81e-21,2;DOID:1793,2.80e-11,4;DOID:170,5.92e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0001949!5.45e-08!3;UBERON:0002110!3.14e-07!3;UBERON:0006242!3.14e-07!3 | |ontology_enrichment_uberon=UBERON:0001949!5.45e-08!3;UBERON:0002110!3.14e-07!3;UBERON:0006242!3.14e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.60e-14;3!UBERON:0001708;3.10e-11;4!UBERON:0008895;3.10e-11;4!UBERON:0011159;2.97e-09;5!UBERON:0003929;5.70e-07;7 | |ontology_enrichment_uberon_v019=UBERON:0001949;1.60e-14;3!UBERON:0001708;3.10e-11;4!UBERON:0008895;3.10e-11;4!UBERON:0011159;2.97e-09;5!UBERON:0003929;5.70e-07;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.60e-14,3;UBERON:0001708,2.53e-11,4;UBERON:0008895,2.53e-11,4;UBERON:0011159,2.53e-09,5;UBERON:0010188,5.54e-08,6;UBERON:0002539,5.54e-08,6;UBERON:0008816,5.54e-08,6 | |||
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|short_description=p7@VNN1 | |short_description=p7@VNN1 | ||
}} | }} |
Latest revision as of 19:58, 24 September 2015
Short description: | p7@VNN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_VNN1_5end |
Coexpression cluster: | NA |
Association with transcript: | -27bp_to_uc003qdn.2_5end |
EntrezGene: | VNN1 |
HGNC: | 12705 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 1.22e-14 | 3 |
gingival epithelial cell | 1.60e-14 | 3 |
epithelial cell of pancreas | 2.80e-11 | 4 |
macrophage | 6.78e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.60e-14 | 3 |
jaw skeleton | 2.53e-11 | 4 |
splanchnocranium | 2.53e-11 | 4 |
primary subdivision of cranial skeletal system | 2.53e-09 | 5 |
protuberance | 5.54e-08 | 6 |
pharyngeal arch | 5.54e-08 | 6 |
embryonic head | 5.54e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 3.81e-21 | 2 |
pancreatic cancer | 2.80e-11 | 4 |
endocrine gland cancer | 5.92e-08 | 6 |