FFCP PHASE1:Hg19::chr4:119810034..119810045,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=171024 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17732 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UMS6 | |||
|association_with_transcript=24bp_to_ENST00000429713_5end | |||
|cluster_id=chr4:119810034..119810045,+ | |||
|coexpression_cluster_id=C1040 | |||
|description=CAGE_peak_8_at_SYNPO2_5end | |||
|id=chr4:119810034..119810045,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;7.82e-17;65!UBERON:0004872;1.39e-16;7!UBERON:0006965;1.04e-10;2!UBERON:0007297;1.04e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;8.73e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,6.35e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.80e-52!115;UBERON:0001049!1.35e-16!57;UBERON:0005068!1.35e-16!57;UBERON:0006241!1.35e-16!57;UBERON:0007135!1.35e-16!57;UBERON:0003075!1.20e-15!86;UBERON:0007284!1.20e-15!86;UBERON:0002346!2.17e-14!90;UBERON:0002616!2.18e-14!59;UBERON:0003080!4.42e-14!42;UBERON:0002780!3.71e-13!41;UBERON:0001890!3.71e-13!41;UBERON:0006240!3.71e-13!41;UBERON:0001893!4.46e-13!34;UBERON:0002791!3.11e-12!33;UBERON:0000073!1.17e-11!94;UBERON:0001016!1.17e-11!94;UBERON:0001869!1.42e-11!32;UBERON:0001017!1.89e-11!82;UBERON:0000955!2.13e-11!69;UBERON:0006238!2.13e-11!69;UBERON:0005743!2.22e-11!86;UBERON:0003056!9.94e-11!61;UBERON:0000153!1.39e-10!129;UBERON:0007811!1.39e-10!129;UBERON:0002020!2.21e-10!34;UBERON:0003528!2.21e-10!34;UBERON:0000481!3.58e-09!347;UBERON:0000033!5.18e-09!123;UBERON:0000477!2.98e-08!286;UBERON:0000956!6.49e-08!25;UBERON:0000203!6.49e-08!25;UBERON:0004121!8.80e-08!169;UBERON:0000062!1.03e-07!511;UBERON:0000924!2.63e-07!173;UBERON:0006601!2.63e-07!173;UBERON:0002619!4.14e-07!22;UBERON:0002420!4.82e-07!9;UBERON:0007245!4.82e-07!9;UBERON:0010009!4.82e-07!9;UBERON:0010011!4.82e-07!9;UBERON:0000454!4.82e-07!9;UBERON:0000468!4.97e-07!659;UBERON:0004111!5.35e-07!241;UBERON:0001950!6.80e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;6.57e-15;3!UBERON:0004054;6.57e-15;3!UBERON:0007100;3.02e-14;25!UBERON:0005904;2.61e-11;4!UBERON:0003135;1.16e-10;11!UBERON:0002108;4.01e-09;4!UBERON:0004175;6.78e-08;21!UBERON:0003978;1.05e-07;3!UBERON:0000946;1.05e-07;3!UBERON:0004151;1.44e-07;3!UBERON:0000948;2.13e-07;22!UBERON:0003101;2.98e-07;22!UBERON:0000079;2.98e-07;22!UBERON:0007023;3.57e-07;114!UBERON:0002106;4.98e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.71e-37,114;UBERON:0006947,5.43e-15,3;UBERON:0004054,5.43e-15,3;UBERON:0007100,4.39e-13,27;UBERON:0005904,2.27e-11,4;UBERON:0003135,9.73e-11,11;UBERON:0003103,2.65e-09,68;UBERON:0002108,3.74e-09,4;UBERON:0005409,3.81e-08,25;UBERON:0003978,1.04e-07,3;UBERON:0009751,1.04e-07,3;UBERON:0000946,1.04e-07,3;UBERON:0002523,1.04e-07,3;UBERON:0005983,1.04e-07,3;UBERON:0002165,1.04e-07,3;UBERON:0002062,1.04e-07,3;UBERON:0007280,1.04e-07,3;UBERON:0004151,1.64e-07,3;UBERON:0003101,2.66e-07,22;UBERON:0000079,2.66e-07,22;UBERON:0002106,4.83e-07,3;UBERON:0004854,4.83e-07,3;UBERON:0009034,4.83e-07,3;UBERON:0002095,4.83e-07,3;UBERON:0004782,4.83e-07,3;UBERON:0003281,4.83e-07,3;UBERON:0009664,4.83e-07,3;UBERON:0002296,4.83e-07,3;UBERON:0005602,4.83e-07,3;UBERON:0001179,4.83e-07,3;UBERON:0006293,4.83e-07,3;UBERON:0003133,9.48e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0.50133791063589,0,0,0,0.0945348171640679,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0,0,0,0,0,1.24484414159907,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0.858486162094873,0,0,0,0,0,0.141775097242386,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0.157702415033935,0.117141414992713,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321707842287215,0,0,0.177561725313127,0,0,0,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0.329294892959902,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,5.18044769452781,0.552567831062295,0,0,0,0,0,0,0,4.43895325366201,0,0,0,0.0927680981618513,0,0.260427761085233,0,1.44999915086959,0,0.762760950878299,0,0,0,0,0.885741385813839,0.241192877250816,0,0,0,0.658156191461918,0,0,4.61701551022782,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,4.42287822516696,0,0,0,0,0.606610196826093,0,0.468528891450678,0,0,0,1.18375320854817,2.41981432097328,0.30607276163049,1.01098527405581,0,0,0,0,0,0,0,0,0,0,0,5.59125338374496,0,0,0,0,5.43138492335149,0,0.90392296312213,0,0,0.443175571691151,0,0,1.70762395791482,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0,3.35138881526705,7.33313356837388,0.717873024576814,2.99518500748487,4.72148652950228,4.24025769139558,1.67958681216816,0,0,0.0787831823072236,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.485996453264197,0,0.236417121897595,0.157363764404994,0,0,0,2.1440859791201,5.29673576292345,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.320362237703084,1.25763444079733,0.414239055347196,0,0.197611631897944,0,0,0,0.2506898940227,0.306345576763462,0.327872630709804,0,0,0.366078794705889,0.1251909307065,0,0.332787154610557,0.807253238237985,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0.323474434190045,0,1.09209638192014,0,0,0,0,0.318004350653419,0,0,0,0,0.128458450192919,0,0,0,0.252071696221718,0.276629009856872,0.645902582527404,0,0,0,0,0,0,0,0,4.43740937260618,0,0,0,0,0,0.472763092328763,0,0,0.380494861163441,0,0,4.46590060550365,0,0.255524855279191,0,0,0,0.227662191351298,0.0887023701626388,0,0,0.271878931907327,0.197318320688547,0,0,2.66876515691748,0.157115589916002,0,5.47895232305697,0,0,4.21711610642272,0,0,0,0,0,0,0,0,0,0,1.69354820076372,0,0,0,0,0,0,2.58971534875158,2.56657017140618,0,0.485710993059139,0,0,0,0,0,0,2.85544384999395,3.0598338470554,0,8.33504293963279,0,0.785233868459781,0.297046400327086,0,0,1.59772660565751,1.28915775947154,0,0,0,0,0.730336388246517,0.458729283404541,0.143339583151451,0,0.0679914901909147,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,1.66713136080127,0.267964130156178,0,0.20686599172379,0.852935927603924,0.23806443146374,0.322944549180031,0.558672428662721,0.112131862580613,0.381882949668989,0.202117188958219,1.08858373948481,0.684466602170562,0.404112318087525,0.645499848534087,0.99798106963804,0,0.106727345877715,0,0,0,6.47879654169192,5.2896503181046,5.3260541934841,1.81146414231924,0 | |||
|short_description=p8@SYNPO2 | |||
}} |
Latest revision as of 21:28, 24 September 2015
Short description: | p8@SYNPO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SYNPO2_5end |
Coexpression cluster: | C1040_smooth_aorta_heart_bladder_uterus_penis_cervix |
Association with transcript: | 24bp_to_ENST00000429713_5end |
EntrezGene: | SYNPO2 |
HGNC: | 17732 |
UniProt: | Q9UMS6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 6.71e-37 | 114 |
male genital duct | 5.43e-15 | 3 |
internal male genitalia | 5.43e-15 | 3 |
primary circulatory organ | 4.39e-13 | 27 |
duct of male reproductive system | 2.27e-11 | 4 |
male reproductive organ | 9.73e-11 | 11 |
compound organ | 2.65e-09 | 68 |
small intestine | 3.74e-09 | 4 |
gastrointestinal system | 3.81e-08 | 25 |
valve | 1.04e-07 | 3 |
cardiac mesenchyme | 1.04e-07 | 3 |
cardial valve | 1.04e-07 | 3 |
tunica intima | 1.04e-07 | 3 |
heart layer | 1.04e-07 | 3 |
endocardium | 1.04e-07 | 3 |
endocardial cushion | 1.04e-07 | 3 |
presumptive endocardium | 1.04e-07 | 3 |
cardiac chamber | 1.64e-07 | 3 |
male organism | 2.66e-07 | 22 |
male reproductive system | 2.66e-07 | 22 |
spleen | 4.83e-07 | 3 |
gastrointestinal system mesentery | 4.83e-07 | 3 |
stomach region | 4.83e-07 | 3 |
mesentery | 4.83e-07 | 3 |
gastrointestinal system serosa | 4.83e-07 | 3 |
mesentery of stomach | 4.83e-07 | 3 |
gut mesentery | 4.83e-07 | 3 |
dorsal mesentery | 4.83e-07 | 3 |
dorsal mesogastrium | 4.83e-07 | 3 |
peritoneal cavity | 4.83e-07 | 3 |
spleen primordium | 4.83e-07 | 3 |
reproductive organ | 9.48e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
heart disease | 6.35e-11 | 2 |