FFCP PHASE1:Hg19::chr19:7766958..7766972,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2208 | |EntrezGene=2208 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3612 | |HGNC=3612 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=26bp_to_uc002mhn.2,uc010xjt.1_5end | |association_with_transcript=26bp_to_uc002mhn.2,uc010xjt.1_5end | ||
|cluster_id=chr19:7766958..7766972,- | |||
|coexpression_cluster_id=C47 | |coexpression_cluster_id=C47 | ||
|description=CAGE_peak_3_at_FCER2_5end | |description=CAGE_peak_3_at_FCER2_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000945!6.33e-51!24;CL:0000826!6.33e-51!24;CL:0000236!4.46e-32!14;CL:0002087!2.65e-28!119;CL:0000542!2.04e-25!53;CL:0000051!2.04e-25!53;CL:0000738!4.73e-25!140;CL:0000838!5.65e-24!52;CL:0000037!1.30e-21!172;CL:0000566!1.30e-21!172;CL:0002031!6.86e-21!124;CL:0000988!9.76e-20!182;CL:0002032!3.35e-18!165;CL:0000837!3.35e-18!165;CL:0000842!1.52e-08!3 | |ontology_enrichment_celltype=CL:0000945!6.33e-51!24;CL:0000826!6.33e-51!24;CL:0000236!4.46e-32!14;CL:0002087!2.65e-28!119;CL:0000542!2.04e-25!53;CL:0000051!2.04e-25!53;CL:0000738!4.73e-25!140;CL:0000838!5.65e-24!52;CL:0000037!1.30e-21!172;CL:0000566!1.30e-21!172;CL:0002031!6.86e-21!124;CL:0000988!9.76e-20!182;CL:0002032!3.35e-18!165;CL:0000837!3.35e-18!165;CL:0000842!1.52e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.39e-77;24!CL:0000236;1.36e-52;13!CL:0000542;1.20e-22;53!CL:0000226;4.49e-14;3!CL:0000842;4.49e-14;3!CL:0002087;7.59e-07;104 | |ontology_enrichment_celltype_v019=CL:0000945;3.39e-77;24!CL:0000236;1.36e-52;13!CL:0000542;1.20e-22;53!CL:0000226;4.49e-14;3!CL:0000842;4.49e-14;3!CL:0002087;7.59e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.13e-77,24;CL:0000826,3.13e-77,24;CL:0000236,3.49e-57,14;CL:0000838,1.89e-36,52;CL:0000542,1.15e-35,53;CL:0000051,1.15e-35,53;CL:0002087,2.23e-18,115;CL:0000738,1.04e-14,136;CL:0000226,3.74e-14,3;CL:0000842,3.74e-14,3;CL:0000037,3.43e-13,168;CL:0002031,7.67e-13,120;CL:0000988,3.15e-12,177;CL:0002032,1.99e-10,161;CL:0000837,1.99e-10,161;CL:0000785,2.64e-10,2;CL:0000955,2.64e-10,2;CL:0000818,2.64e-10,2;CL:0000954,2.64e-10,2;CL:0000816,2.64e-10,2;CL:0000817,3.83e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;1.20e-22;53!UBERON:0004872;5.39e-11;7!CL:0000954;2.51e-10;2 | |ontology_enrichment_development_v019=CL:0000051;1.20e-22;53!UBERON:0004872;5.39e-11;7!CL:0000954;2.51e-10;2 | ||
|ontology_enrichment_disease=DOID:0060058!1.44e-11!10 | |ontology_enrichment_disease=DOID:0060058!1.44e-11!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;3.29e-11;10 | |ontology_enrichment_disease_v019=DOID:0060058;3.29e-11;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.37e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!6.26e-23!15;UBERON:0000179!6.26e-23!15;UBERON:0000463!6.26e-23!15;UBERON:0002193!1.28e-17!112;UBERON:0002390!2.47e-17!102;UBERON:0003061!2.47e-17!102;UBERON:0004177!3.29e-09!7;UBERON:0002106!6.81e-09!3;UBERON:0004854!6.81e-09!3;UBERON:0009034!6.81e-09!3;UBERON:0002095!6.81e-09!3;UBERON:0004782!6.81e-09!3;UBERON:0003281!6.81e-09!3;UBERON:0009664!6.81e-09!3;UBERON:0002296!6.81e-09!3;UBERON:0005602!6.81e-09!3;UBERON:0001179!6.81e-09!3;UBERON:0006293!6.81e-09!3 | |ontology_enrichment_uberon=UBERON:0000178!6.26e-23!15;UBERON:0000179!6.26e-23!15;UBERON:0000463!6.26e-23!15;UBERON:0002193!1.28e-17!112;UBERON:0002390!2.47e-17!102;UBERON:0003061!2.47e-17!102;UBERON:0004177!3.29e-09!7;UBERON:0002106!6.81e-09!3;UBERON:0004854!6.81e-09!3;UBERON:0009034!6.81e-09!3;UBERON:0002095!6.81e-09!3;UBERON:0004782!6.81e-09!3;UBERON:0003281!6.81e-09!3;UBERON:0009664!6.81e-09!3;UBERON:0002296!6.81e-09!3;UBERON:0005602!6.81e-09!3;UBERON:0001179!6.81e-09!3;UBERON:0006293!6.81e-09!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.07e-41;15!UBERON:0000179;4.07e-41;15!UBERON:0000463;4.07e-41;15!UBERON:0002390;2.71e-31;32!UBERON:0002193;1.62e-22;42!UBERON:0002106;9.67e-15;3!UBERON:0004177;4.90e-09;5!UBERON:0005057;4.90e-09;5 | |ontology_enrichment_uberon_v019=UBERON:0000178;4.07e-41;15!UBERON:0000179;4.07e-41;15!UBERON:0000463;4.07e-41;15!UBERON:0002390;2.71e-31;32!UBERON:0002193;1.62e-22;42!UBERON:0002106;9.67e-15;3!UBERON:0004177;4.90e-09;5!UBERON:0005057;4.90e-09;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.07e-41,15;UBERON:0000179,4.07e-41,15;UBERON:0000463,4.07e-41,15;UBERON:0002106,8.81e-15,3;UBERON:0004854,8.81e-15,3;UBERON:0009034,8.81e-15,3;UBERON:0002095,8.81e-15,3;UBERON:0004782,8.81e-15,3;UBERON:0003281,8.81e-15,3;UBERON:0009664,8.81e-15,3;UBERON:0002296,8.81e-15,3;UBERON:0005602,8.81e-15,3;UBERON:0001179,8.81e-15,3;UBERON:0006293,8.81e-15,3;UBERON:0002193,1.56e-09,108;UBERON:0002390,2.92e-08,98;UBERON:0003061,2.92e-08,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.6351499796518,25.6153839083831,29.3591214300024,0,0,0.619264493264304,0,0,0,0.154934401160603,1.84820002233648,0,0,0,0,0,0.32389366601898,0,0,0,0,0.232429036905685,0,0.309706370895104,0.575384784644301,0,0,0,0,0,0.188242339542605,0.545812300115692,0,0,0,0,0,0.797854630486527,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0,105.597746676794,92.2974253033002,103.183073448172,36.2720689181531,60.0593980554019,95.4089050324442,113.699718118996,124.026988089597,68.3055562931338,44.0427892028204,38.2273228125229,0,1.12101712596307,0.263384084775077,0,0,0,0,0.32592226663359,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0.649094787309367,0.174129737299267,0.531831842075461,0.238490624305342,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9624326269493,2.15714200818617,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.58192370155386,4.58782324285425,4.5571774973933,5.00286728461357,4.52498500394814,3.24236655596359,2.16012574895246,4.75875105776562,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,1.00299045849731,0,0,0,0,0,0,0,0,0,0,4.69682656402951,0,0,35.3253391673269,0,0,0,1.02314474045374,0.295930216910801,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.094728735294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3623064816045,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,6.45015828355536,0.197611631897944,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,39.8709596942996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.82700291475092,4.70542582207113,17.6895845987124,0,0,0,0,0.917458566809082,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.968833647540092,0.31037357147929,0,0,0,0,0,6.26374093035664,0.215166616178029,0,0,0,0,0,0,0,0,0,11.6738800282795,197.149622766488 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.6351499796518,25.6153839083831,29.3591214300024,0,0,0.619264493264304,0,0,0,0.154934401160603,1.84820002233648,0,0,0,0,0,0.32389366601898,0,0,0,0,0.232429036905685,0,0.309706370895104,0.575384784644301,0,0,0,0,0,0.188242339542605,0.545812300115692,0,0,0,0,0,0.797854630486527,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0,105.597746676794,92.2974253033002,103.183073448172,36.2720689181531,60.0593980554019,95.4089050324442,113.699718118996,124.026988089597,68.3055562931338,44.0427892028204,38.2273228125229,0,1.12101712596307,0.263384084775077,0,0,0,0,0.32592226663359,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0.649094787309367,0.174129737299267,0.531831842075461,0.238490624305342,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9624326269493,2.15714200818617,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.58192370155386,4.58782324285425,4.5571774973933,5.00286728461357,4.52498500394814,3.24236655596359,2.16012574895246,4.75875105776562,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,1.00299045849731,0,0,0,0,0,0,0,0,0,0,4.69682656402951,0,0,35.3253391673269,0,0,0,1.02314474045374,0.295930216910801,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.094728735294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3623064816045,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,6.45015828355536,0.197611631897944,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,39.8709596942996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.82700291475092,4.70542582207113,17.6895845987124,0,0,0,0,0.917458566809082,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.968833647540092,0.31037357147929,0,0,0,0,0,6.26374093035664,0.215166616178029,0,0,0,0,0,0,0,0,0,11.6738800282795,197.149622766488 | ||
|short_description=p3@FCER2 | |short_description=p3@FCER2 | ||
}} | }} |
Latest revision as of 21:41, 24 September 2015
Short description: | p3@FCER2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FCER2_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 26bp_to_uc002mhn.2, uc010xjt.1_5end |
EntrezGene: | FCER2 |
HGNC: | 3612 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.13e-77 | 24 |
pro-B cell | 3.13e-77 | 24 |
B cell | 3.49e-57 | 14 |
lymphoid lineage restricted progenitor cell | 1.89e-36 | 52 |
lymphocyte | 1.15e-35 | 53 |
common lymphoid progenitor | 1.15e-35 | 53 |
nongranular leukocyte | 2.23e-18 | 115 |
leukocyte | 1.04e-14 | 136 |
single nucleate cell | 3.74e-14 | 3 |
mononuclear cell | 3.74e-14 | 3 |
hematopoietic stem cell | 3.43e-13 | 168 |
hematopoietic lineage restricted progenitor cell | 7.67e-13 | 120 |
hematopoietic cell | 3.15e-12 | 177 |
hematopoietic oligopotent progenitor cell | 1.99e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.99e-10 | 161 |
mature B cell | 2.64e-10 | 2 |
pre-B-II cell | 2.64e-10 | 2 |
transitional stage B cell | 2.64e-10 | 2 |
small pre-B-II cell | 2.64e-10 | 2 |
immature B cell | 2.64e-10 | 2 |
precursor B cell | 3.83e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 4.07e-41 | 15 |
haemolymphatic fluid | 4.07e-41 | 15 |
organism substance | 4.07e-41 | 15 |
spleen | 8.81e-15 | 3 |
gastrointestinal system mesentery | 8.81e-15 | 3 |
stomach region | 8.81e-15 | 3 |
mesentery | 8.81e-15 | 3 |
gastrointestinal system serosa | 8.81e-15 | 3 |
mesentery of stomach | 8.81e-15 | 3 |
gut mesentery | 8.81e-15 | 3 |
dorsal mesentery | 8.81e-15 | 3 |
dorsal mesogastrium | 8.81e-15 | 3 |
peritoneal cavity | 8.81e-15 | 3 |
spleen primordium | 8.81e-15 | 3 |
hemolymphoid system | 1.56e-09 | 108 |
hematopoietic system | 2.92e-08 | 98 |
blood island | 2.92e-08 | 98 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.37e-11 | 10 |