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FFCP PHASE1:Hg19::chr16:1657304..1657308,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=9742
|EntrezGene=9742
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=29077
|HGNC=29077
|TSSclassifier=strong
|UniProt=Q96RY7
|UniProt=Q96RY7
|association_with_transcript=-4bp_to_BC035577_5end
|association_with_transcript=-4bp_to_BC035577_5end
|cluster_id=chr16:1657304..1657308,-
|description=CAGE_peak_4_at_IFT140_5end
|description=CAGE_peak_4_at_IFT140_5end
|id=chr16:1657304..1657308,-
|id=chr16:1657304..1657308,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019=CL:0002591;7.36e-18;1!CL:0000632;8.14e-07;3!CL:0000307;8.14e-07;3
|ontology_enrichment_celltype_v019=CL:0002591;7.36e-18;1!CL:0000632;8.14e-07;3!CL:0000307;8.14e-07;3
|ontology_enrichment_celltype_v019_2=CL:0002591,1.44e-17,1;CL:0000632,6.88e-07,3
|ontology_enrichment_development_v019=UBERON:0009117;1.20e-07;10!UBERON:0005564;1.20e-07;10!CL:0000377;8.14e-07;3
|ontology_enrichment_development_v019=UBERON:0009117;1.20e-07;10!UBERON:0005564;1.20e-07;10!CL:0000377;8.14e-07;3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007023!1.13e-08!115;UBERON:0000955!2.08e-08!69;UBERON:0006238!2.08e-08!69;UBERON:0000033!6.84e-08!123;UBERON:0002616!7.76e-08!59;UBERON:0000073!2.73e-07!94;UBERON:0001016!2.73e-07!94;UBERON:0000153!2.97e-07!129;UBERON:0007811!2.97e-07!129;UBERON:0005743!3.37e-07!86;UBERON:0003075!4.06e-07!86;UBERON:0007284!4.06e-07!86;UBERON:0001049!5.58e-07!57;UBERON:0005068!5.58e-07!57;UBERON:0006241!5.58e-07!57;UBERON:0007135!5.58e-07!57;UBERON:0001017!7.74e-07!82;UBERON:0000475!8.20e-07!365
|ontology_enrichment_uberon=UBERON:0007023!1.13e-08!115;UBERON:0000955!2.08e-08!69;UBERON:0006238!2.08e-08!69;UBERON:0000033!6.84e-08!123;UBERON:0002616!7.76e-08!59;UBERON:0000073!2.73e-07!94;UBERON:0001016!2.73e-07!94;UBERON:0000153!2.97e-07!129;UBERON:0007811!2.97e-07!129;UBERON:0005743!3.37e-07!86;UBERON:0003075!4.06e-07!86;UBERON:0007284!4.06e-07!86;UBERON:0001049!5.58e-07!57;UBERON:0005068!5.58e-07!57;UBERON:0006241!5.58e-07!57;UBERON:0007135!5.58e-07!57;UBERON:0001017!7.74e-07!82;UBERON:0000475!8.20e-07!365
|ontology_enrichment_uberon_v019=UBERON:0003126;2.03e-10;7!UBERON:0001005;2.03e-10;7!UBERON:0003127;1.33e-09;2!UBERON:0000078;1.33e-09;2!UBERON:0002012;1.33e-09;2!UBERON:0008886;1.33e-09;2!UBERON:0000473;2.44e-09;8!UBERON:0003135;5.00e-07;11
|ontology_enrichment_uberon_v019=UBERON:0003126;2.03e-10;7!UBERON:0001005;2.03e-10;7!UBERON:0003127;1.33e-09;2!UBERON:0000078;1.33e-09;2!UBERON:0002012;1.33e-09;2!UBERON:0008886;1.33e-09;2!UBERON:0000473;2.44e-09;8!UBERON:0003135;5.00e-07;11
|ontology_enrichment_uberon_v019_2=UBERON:0003126,2.97e-10,7;UBERON:0001005,2.97e-10,7;UBERON:0003127,1.71e-09,2;UBERON:0000078,1.86e-09,2;UBERON:0007497,1.86e-09,2;UBERON:0003643,1.86e-09,2;UBERON:0003504,1.86e-09,2;UBERON:0003469,1.86e-09,2;UBERON:0003496,1.86e-09,2;UBERON:0002012,1.86e-09,2;UBERON:0008886,1.86e-09,2;UBERON:0007303,1.86e-09,2;UBERON:0002061,1.86e-09,2;UBERON:0005432,1.86e-09,2;UBERON:0004363,1.86e-09,2;UBERON:0000473,1.99e-09,8;UBERON:0003135,4.30e-07,11;UBERON:0009722,6.35e-07,11;UBERON:0007690,6.35e-07,11
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|short_description=p4@IFT140
|short_description=p4@IFT140
}}
}}

Latest revision as of 21:52, 24 September 2015

Short description:p4@IFT140
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_4_at_IFT140_5end
Coexpression cluster:NA
Association with transcript: -4bp_to_BC035577_5end
EntrezGene:IFT140
HGNC: 29077
UniProt: Q96RY7
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data