FFCP PHASE1:Hg19::chr5:137514834..137514865,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:137514834..137514865,+ to FFCP PHASE1:Hg19::chr5:137514834..137514865,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10112 | |EntrezGene=10112 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9787 | |HGNC=9787 | ||
|TSSclassifier=strong | |||
|UniProt=B4DL79 | |UniProt=B4DL79 | ||
|association_with_transcript=0bp_to_ENST00000503417,ENST00000508792,ENST00000511638_5end | |||
|cluster_id=chr5:137514834..137514865,+ | |||
|coexpression_cluster_id=C1026 | |||
|description=CAGE_peak_2_at_KIF20A_5end | |||
|id=chr5:137514834..137514865,+ | |||
|ontology_enrichment_celltype=CL:0000548!7.29e-26!679;CL:0000004!7.29e-26!679;CL:0000255!7.29e-26!679;CL:0000012!4.03e-25!682;CL:0000066!3.32e-20!254;CL:0000055!1.46e-18!180;CL:0002321!1.64e-15!248;CL:0000220!4.81e-15!246;CL:0000003!8.98e-15!722;CL:0000144!4.08e-11!625;CL:0000057!1.17e-10!75;CL:0000063!5.22e-10!578;CL:0000222!6.70e-09!119;CL:0000076!5.38e-08!62;CL:0002371!5.67e-07!591;CL:0002620!7.14e-07!23;CL:0000213!8.93e-07!57;CL:0000215!8.93e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.23e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.15e-19,253;CL:0002321,3.47e-15,250;CL:0000057,1.02e-09,76;CL:0000222,4.49e-09,121;CL:0000076,1.08e-07,63;CL:0000213,2.89e-07,58;CL:0000215,2.89e-07,58;CL:0002620,5.40e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.76e-28!235;DOID:14566!1.68e-27!239;DOID:0050687!1.12e-15!143;DOID:305!5.04e-14!106;DOID:0050686!8.55e-11!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.20e-27,235;DOID:14566,1.72e-26,239;DOID:0050687,8.14e-15,143;DOID:305,6.41e-14,106;DOID:0050686,1.90e-10,137 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.70e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.31e-07;9!UBERON:0001557;4.31e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.29e-07,9 | |||
|phase1_expression=0.54503513781167,1.71280419112787,0.140954404095971,0,0,0.872338524100369,2.53299878168311,0,0.261185628199839,8.84642171405432,10.4670175195864,14.4171305605914,3.9565046734268,8.78741106016331,2.65117900582333,2.6893005858071,4.21886169616784,5.11217063271161,2.43966399395253,23.8854852668969,9.9960338709684,4.70182082217132,27.4786547645814,33.123610867638,33.3943421322175,15.9704018013218,18.144230268438,16.6866856385,0,0,0.77408061658038,9.19421224478927,7.53014796945625,4.06729411183466,12.8595552963301,9.52533857665724,2.05520307534393,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0.574752439954483,0,0,0,0,0,0,0,4.21414535640123,0,0,0,0.501559486172034,0,0,0,4.12218690475142,0,0,0.270803863765016,2.0494611156108,2.34106825607781,4.60426132890293,5.80335037350282,5.21645554323094,0,0,0,7.81834464613207,0,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0,0,0,0,17.4382223522945,21.0973227041825,71.2035130197596,5.0133791063589,7.67686550492366,26.2444362526863,2.91980922181582,24.8626569141498,8.42571710357743,15.9859309961489,0.327447688744282,1.82147644146271,11.1235332835329,0,0,0,0,0,0,19.4787159219371,12.0432843314857,10.7613555498354,3.39184765154406,2.93649605346934,14.8563742647636,12.7486929587454,1.55050055501597,1.42306505074684,2.34304428935269,21.3499538067848,3.80136052859256,7.56592378399325,33.0896772311282,4.0507097394088,32.3265016388369,14.8189385933272,22.6349075771478,10.7321646226118,10.4419222552494,11.3585081236853,0,0,10.9023513035634,1.98788780678127,22.0337090296369,0.132409180813219,49.6227353895448,30.8561492512571,8.41016400213461,6.4049397437823,2.22000793575444,18.3614510885862,13.2016458628294,32.2019949133514,7.11379909931178,1.72852777344,19.9173217058727,4.37024107562449,7.41613368007784,2.69007624993242,17.1454368019897,23.6334498777472,29.6351202141744,10.2077085627447,33.4109343088009,5.26961483996404,3.56400857184616,2.96720315134268,20.9337113245746,0.718618141816238,41.9156923745625,26.1497706532405,34.0788862045545,21.5099034231611,9.50112166976961,4.5071417671979,42.3102043186878,100.81697525714,3.84403299873421,5.08636562782948,91.5277843057427,29.1638657744782,20.0959621235591,7.258557396932,92.4894300682139,42.9697192760886,89.6139898566606,4.05019554026117,7.27407255684654,50.4113621373592,59.947498445446,73.7588576550621,4.63826047591912,7.9096374971342,3.44165514466805,15.7346080907178,15.9035721985782,17.3128974875582,14.3052255921211,17.4101387104184,8.75945661781992,4.69348596989448,9.00537313470039,20.7202382028721,0,0,40.4609256136266,40.9660796889787,44.1050184686772,31.5440762014647,37.2573849398015,41.9968995826641,32.3595139584395,39.2442930250692,31.1645197126576,10.3341763647451,5.60967095213783,8.231480226628,1.47008711385542,0,0.982827216677626,1.18157981336281,12.8024298830249,13.03677448557,18.8724591328378,2.19500570817251,3.37205259772859,10.7566000480445,13.3327361028283,13.6839488230336,6.23960871167747,15.8764476227801,22.9542201850652,0.939269553886573,12.7042474029745,14.8155364024515,6.84914948044554,30.0277671224525,20.6036678902769,0.492434012174795,2.10603838625314,5.64798416697167,4.68669169933885,3.35964256397719,6.94697976487694,17.732587495164,33.4229029291056,13.4183937707824,0,6.4275356829655,0.414656231081544,0,0,6.54028311209341,8.40374536228211,21.0991404978085,3.4214489204541,2.26220483947312,7.50857644609794,6.00235508524214,35.0970294000979,38.8004461261619,34.0289646209208,0.129271715757778,3.57656445851882,12.67954128834,3.98907174877306,10.4007436911366,27.5211890460492,12.766421882095,16.5181750989982,5.57614175266775,0,23.8739697666423,16.2868092146868,4.6200953336531,23.7585561880029,0,0,3.499054691372,1.2162378064119,0.502257091432126,0,3.35474797688216,0,8.5582143024431,8.68687840005475,8.42452922456572,22.5616813682268,7.3976195035728,0,0,0,6.09827098133912,2.60279707715243,3.86644406388848,7.203199409377,7.01732626818479,0,0,0,1.34960640891054,1.50051156317903,2.98391526069709,1.66376689224646,15.1664640477587,7.7274183366628,5.97421216462837,0.601892199455438,0,4.1389228517002,45.8315662989451,10.5090426068771,23.8061103642547,1.95801157462741,1.02943027143257,0,0,0,2.42502057157008,14.9791895559447,15.4219049598137,0.496215615637554,4.14347327877769,0.561320188866147,0.768834895534206,8.18731598506726,0,1.48418066444991,20.0472601943452,12.4293207719189,24.3917653361013,9.8658341544888,16.0370322274744,10.2730532152879,0.601519410909855,0.0920809889358963,35.5924789310281,18.9374814726986,1.44236856455367,4.96319574198153,10.4740858462004,10.1965469992991,8.76835347919564,16.14939922061,7.96133688496276,17.3495579382046,21.3756756941118,3.08454505380579,11.3797503768418,3.01013864312912,18.3510916592428,8.31076008928724,10.2982387172202,31.3541623603686,27.4507223576146,38.9804190176912,12.7925711822885,1.95227036798582,0.618246069886334,9.98107166519943,11.551329988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| ||
|short_description=p2@KIF20A | |||
}} | }} |
Latest revision as of 22:00, 24 September 2015
Short description: | p2@KIF20A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KIF20A_5end |
Coexpression cluster: | C1026_Fibroblast_mesothelioma_Chondrocyte_epidermoid_Reticulocytes_clear_myxofibrosarcoma |
Association with transcript: | 0bp_to_ENST00000503417, ENST00000508792, ENST00000511638_5end |
EntrezGene: | KIF20A |
HGNC: | 9787 |
UniProt: | B4DL79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.15e-19 | 253 |
embryonic cell | 3.47e-15 | 250 |
fibroblast | 1.02e-09 | 76 |
mesodermal cell | 4.49e-09 | 121 |
squamous epithelial cell | 1.08e-07 | 63 |
lining cell | 2.89e-07 | 58 |
barrier cell | 2.89e-07 | 58 |
skin fibroblast | 5.40e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.29e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.20e-27 | 235 |
disease of cellular proliferation | 1.72e-26 | 239 |
cell type cancer | 8.14e-15 | 143 |
carcinoma | 6.41e-14 | 106 |
organ system cancer | 1.90e-10 | 137 |