FFCP PHASE1:Hg19::chr2:220436978..220436989,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3623 | |EntrezGene=3623 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6065 | |HGNC=6065 | ||
|TSSclassifier=strong | |||
|UniProt=P05111 | |UniProt=P05111 | ||
|association_with_transcript=24bp_to_NM_002191,uc002vmk.1_5end | |association_with_transcript=24bp_to_NM_002191,uc002vmk.1_5end | ||
|cluster_id=chr2:220436978..220436989,+ | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_5_at_INHA_5end | |description=CAGE_peak_5_at_INHA_5end | ||
|id=chr2:220436978..220436989,+ | |id=chr2:220436978..220436989,+ | ||
|ontology_enrichment_celltype=CL:0002541!4.23e-19!3;CL:0000319!5.45e-07!1 | |ontology_enrichment_celltype=CL:0002541!4.23e-19!3;CL:0000319!5.45e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.54e-66;3!CL:0000349;4.93e-19;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.23e-66,3;CL:0000349,4.39e-19,19 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.34e-23;1!UBERON:0003124;2.34e-23;1!UBERON:0009117;2.58e-20;10!UBERON:0005564;2.58e-20;10 | |||
|ontology_enrichment_disease=DOID:3030!5.45e-07!1;DOID:178!6.49e-07!1;DOID:326!6.49e-07!1;DOID:3978!6.49e-07!1;DOID:3394!6.49e-07!1;DOID:5844!6.49e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003124!1.56e-21!7;UBERON:0005631!3.15e-20!14;UBERON:0000158!3.15e-20!14;UBERON:0000476!4.23e-19!3;UBERON:0000920!4.23e-19!3;UBERON:0000478!7.16e-15!24;UBERON:0001882!4.06e-07!1;UBERON:0005403!4.06e-07!1;UBERON:0001987!7.31e-07!4;UBERON:0004340!7.31e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.54e-66;3!UBERON:0000920;1.54e-66;3!UBERON:0005631;1.19e-35;10!UBERON:0000158;1.19e-35;10!UBERON:0000478;4.82e-33;24!UBERON:0000473;5.99e-12;8!UBERON:0000991;4.80e-10;21!UBERON:0003135;5.98e-09;11!UBERON:0001987;7.91e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.23e-66,3;UBERON:0003124,1.02e-50,7;UBERON:0005631,1.41e-39,14;UBERON:0000158,1.41e-39,14;UBERON:0000478,4.43e-33,24;UBERON:0000473,6.51e-12,8;UBERON:0000991,5.03e-10,21;UBERON:0009196,5.03e-10,21;UBERON:0009117,5.03e-10,21;UBERON:0005564,5.03e-10,21;UBERON:0004176,1.34e-09,22;UBERON:0003135,6.35e-09,11;UBERON:0004923,1.39e-08,66;UBERON:0003133,1.08e-07,48;UBERON:0001987,7.70e-07,4;UBERON:0004340,7.70e-07,4 | |||
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|short_description=p5@INHA | |short_description=p5@INHA | ||
}} | }} |
Latest revision as of 22:03, 24 September 2015
Short description: | p5@INHA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_INHA_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 24bp_to_NM_002191, uc002vmk.1_5end |
EntrezGene: | INHA |
HGNC: | 6065 |
UniProt: | P05111 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.23e-66 | 3 |
extraembryonic cell | 4.39e-19 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.23e-66 | 3 |
chorion | 1.02e-50 | 7 |
extraembryonic membrane | 1.41e-39 | 14 |
membranous layer | 1.41e-39 | 14 |
extraembryonic structure | 4.43e-33 | 24 |
testis | 6.51e-12 | 8 |
gonad | 5.03e-10 | 21 |
indifferent external genitalia | 5.03e-10 | 21 |
indifferent gonad | 5.03e-10 | 21 |
gonad primordium | 5.03e-10 | 21 |
external genitalia | 1.34e-09 | 22 |
male reproductive organ | 6.35e-09 | 11 |
organ component layer | 1.39e-08 | 66 |
reproductive organ | 1.08e-07 | 48 |
placenta | 7.70e-07 | 4 |
allantois | 7.70e-07 | 4 |