FFCP PHASE1:Hg19::chr19:8117200..8117216,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6370 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10624 | |||
|TSSclassifier=strong | |||
|UniProt=A6NI52,O15444 | |||
|association_with_transcript=-429bp_to_NM_001201359,NM_005624,uc002mjc.3_5end | |||
|cluster_id=chr19:8117200..8117216,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_3_at_CCL25_5end | |||
|id=chr19:8117200..8117216,+ | |||
|ontology_enrichment_celltype=CL:0000945!1.52e-09!24;CL:0000826!1.52e-09!24;CL:0000838!4.24e-07!52;CL:0000542!6.06e-07!53;CL:0000051!6.06e-07!53 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:630!2.35e-08!1;DOID:0050177!2.35e-08!1;DOID:0050427!2.35e-08!1;DOID:2355!3.34e-08!1;DOID:8552!6.19e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:630;3.16e-29;1!DOID:0050177;3.16e-29;1!DOID:0050427;3.16e-29;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,3.16e-29,1;DOID:0050177,3.16e-29,1;DOID:0050427,3.16e-29,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!2.67e-09!7;UBERON:0001301!5.79e-08!1;UBERON:0002370!6.65e-08!4;UBERON:0005058!6.65e-08!4;UBERON:0009113!6.65e-08!4;UBERON:0003295!6.65e-08!4;UBERON:0005562!6.65e-08!4;UBERON:0002372!8.12e-08!1;UBERON:0001961!8.12e-08!1;UBERON:0001744!8.12e-08!1;UBERON:0001735!8.12e-08!1;UBERON:0003408!9.83e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.49e-51;4!UBERON:0000160;9.82e-26;17!UBERON:0005409;2.78e-20;22!UBERON:0002370;2.37e-15;2!UBERON:0005058;2.37e-15;2!UBERON:0009113;2.37e-15;2!UBERON:0004921;7.71e-12;33!UBERON:0002114;8.99e-11;2!UBERON:0004177;6.39e-07;5!UBERON:0005057;6.39e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.37e-51,4;UBERON:0000160,9.82e-26,17;UBERON:0005409,5.17e-18,25;UBERON:0002114,8.99e-11,2;UBERON:0002370,2.26e-08,4;UBERON:0005058,2.26e-08,4;UBERON:0009113,2.26e-08,4;UBERON:0003295,2.26e-08,4;UBERON:0005562,2.26e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328875809207352,0.552700035571697,0.869409257205157,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66866030566487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,3.18447232212021,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76205998859206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852548188666271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,5.55653938377201,3.71551252856727,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67931165573616,0.869046000142011,0,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.402547587182052,1.60284246151616 | |||
|short_description=p3@CCL25 | |||
}} |
Latest revision as of 23:11, 24 September 2015
Short description: | p3@CCL25 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CCL25_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -429bp_to_NM_001201359, NM_005624, uc002mjc.3_5end |
EntrezGene: | CCL25 |
HGNC: | 10624 |
UniProt: | A6NI52O15444 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 1.37e-51 | 4 |
intestine | 9.82e-26 | 17 |
gastrointestinal system | 5.17e-18 | 25 |
duodenum | 8.99e-11 | 2 |
thymus | 2.26e-08 | 4 |
hemolymphoid system gland | 2.26e-08 | 4 |
thymic region | 2.26e-08 | 4 |
pharyngeal gland | 2.26e-08 | 4 |
thymus primordium | 2.26e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 3.16e-29 | 1 |
monogenic disease | 3.16e-29 | 1 |
xeroderma pigmentosum | 3.16e-29 | 1 |