FFCP PHASE1:Hg19::chrX:38211826..38211874,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5009 | |EntrezGene=5009 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8512 | |HGNC=8512 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000488812_5end | |association_with_transcript=0bp_to_ENST00000488812_5end | ||
|cluster_id=chrX:38211826..38211874,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_OTC_5end | |description=CAGE_peak_1_at_OTC_5end | ||
|id=chrX:38211826..38211874,+ | |id=chrX:38211826..38211874,+ | ||
|ontology_enrichment_celltype=CL:0000181!9.36e-14!12;CL:0000417!9.36e-14!12;CL:0000668!9.36e-14!12;CL:0000414!9.36e-14!12;CL:0000412!9.36e-14!12;CL:0000182!9.36e-14!12 | |ontology_enrichment_celltype=CL:0000181!9.36e-14!12;CL:0000417!9.36e-14!12;CL:0000668!9.36e-14!12;CL:0000414!9.36e-14!12;CL:0000412!9.36e-14!12;CL:0000182!9.36e-14!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.52e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.52e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.18e-10;1!UBERON:0005062;8.56e-10;4!UBERON:0007284;8.56e-10;4!UBERON:0004161;4.45e-08;11!UBERON:0003104;6.22e-07;31!UBERON:0009497;6.63e-07;13 | |||
|ontology_enrichment_disease=DOID:114!6.53e-08!2 | |ontology_enrichment_disease=DOID:114!6.53e-08!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000160;6.65e-18;17!UBERON:0002108;2.14e-17;4!UBERON:0005409;6.34e-14;22!UBERON:0002423;6.84e-13;25!UBERON:0003978;9.42e-13;3!UBERON:0000946;9.42e-13;3!UBERON:0002107;4.01e-12;19!UBERON:0006925;4.01e-12;19!UBERON:0002146;3.01e-10;1!UBERON:0005623;3.01e-10;1!UBERON:0000029;3.96e-10;1!UBERON:0006834;3.96e-10;1!UBERON:0002135;3.96e-10;1!UBERON:0001155;1.35e-09;9!UBERON:0004921;2.00e-08;33!UBERON:0000059;6.09e-08;11!UBERON:0002365;2.29e-07;31!UBERON:0002330;2.29e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.45e-18,17;UBERON:0002108,2.08e-17,4;UBERON:0009497,6.91e-13,25;UBERON:0000015,6.91e-13,25;UBERON:0002423,6.91e-13,25;UBERON:0006235,6.91e-13,25;UBERON:0004161,6.91e-13,25;UBERON:0003978,9.42e-13,3;UBERON:0009751,9.42e-13,3;UBERON:0000946,9.42e-13,3;UBERON:0002523,9.42e-13,3;UBERON:0005983,9.42e-13,3;UBERON:0002165,9.42e-13,3;UBERON:0002062,9.42e-13,3;UBERON:0007280,9.42e-13,3;UBERON:0005409,2.81e-12,25;UBERON:0002107,4.01e-12,19;UBERON:0006925,4.01e-12,19;UBERON:0008836,4.01e-12,19;UBERON:0008835,1.89e-10,22;UBERON:0003894,1.89e-10,22;UBERON:0002146,3.01e-10,1;UBERON:0005623,3.01e-10,1;UBERON:0000029,3.29e-10,1;UBERON:0002135,3.96e-10,1;UBERON:0006834,4.33e-10,1;UBERON:0009854,5.48e-10,23;UBERON:0001155,1.33e-09,9;UBERON:0007499,3.56e-09,25;UBERON:0009856,8.15e-09,26;UBERON:0000059,6.02e-08,11;UBERON:0007023,8.29e-08,114;UBERON:0004921,1.28e-07,118;UBERON:0002365,2.31e-07,31;UBERON:0002330,2.31e-07,31;UBERON:0001007,4.18e-07,145;UBERON:0001555,4.18e-07,145;UBERON:0007026,4.18e-07,145 | |||
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| ||
|short_description=p1@OTC | |short_description=p1@OTC | ||
}} | }} |
Latest revision as of 00:00, 25 September 2015
Short description: | p1@OTC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OTC_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000488812_5end |
EntrezGene: | OTC |
HGNC: | 8512 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.52e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.45e-18 | 17 |
small intestine | 2.08e-17 | 4 |
epithelium of foregut-midgut junction | 6.91e-13 | 25 |
anatomical boundary | 6.91e-13 | 25 |
hepatobiliary system | 6.91e-13 | 25 |
foregut-midgut junction | 6.91e-13 | 25 |
septum transversum | 6.91e-13 | 25 |
valve | 9.42e-13 | 3 |
cardiac mesenchyme | 9.42e-13 | 3 |
cardial valve | 9.42e-13 | 3 |
tunica intima | 9.42e-13 | 3 |
heart layer | 9.42e-13 | 3 |
endocardium | 9.42e-13 | 3 |
endocardial cushion | 9.42e-13 | 3 |
presumptive endocardium | 9.42e-13 | 3 |
gastrointestinal system | 2.81e-12 | 25 |
liver | 4.01e-12 | 19 |
digestive gland | 4.01e-12 | 19 |
liver bud | 4.01e-12 | 19 |
hepatic diverticulum | 1.89e-10 | 22 |
liver primordium | 1.89e-10 | 22 |
pulmonary valve | 3.01e-10 | 1 |
semi-lunar valve | 3.01e-10 | 1 |
lymph node | 3.29e-10 | 1 |
mitral valve | 3.96e-10 | 1 |
uterus or analog | 4.33e-10 | 1 |
digestive tract diverticulum | 5.48e-10 | 23 |
colon | 1.33e-09 | 9 |
epithelial sac | 3.56e-09 | 25 |
sac | 8.15e-09 | 26 |
large intestine | 6.02e-08 | 11 |
adult organism | 8.29e-08 | 114 |
subdivision of digestive tract | 1.28e-07 | 118 |
exocrine gland | 2.31e-07 | 31 |
exocrine system | 2.31e-07 | 31 |
digestive system | 4.18e-07 | 145 |
digestive tract | 4.18e-07 | 145 |
primitive gut | 4.18e-07 | 145 |