FFCP PHASE1:Hg19::chr3:136676818..136676840,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53833 | |EntrezGene=53833 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6004 | |HGNC=6004 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IYY5,F8WC67 | |UniProt=Q8IYY5,F8WC67 | ||
|association_with_transcript=-10bp_to_ENST00000309741,ENST00000469964_5end | |association_with_transcript=-10bp_to_ENST00000309741,ENST00000469964_5end | ||
|cluster_id=chr3:136676818..136676840,+ | |||
|coexpression_cluster_id=C2720 | |coexpression_cluster_id=C2720 | ||
|description=CAGE_peak_1_at_IL20RB_5end | |description=CAGE_peak_1_at_IL20RB_5end | ||
|id=chr3:136676818..136676840,+ | |id=chr3:136676818..136676840,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.62e-15!254;CL:0002076!4.28e-15!43;CL:0000223!5.03e-12!59;CL:0000057!4.73e-11!75;CL:0002251!1.06e-10!21;CL:0000063!2.80e-09!578;CL:0002620!9.75e-09!23;CL:0000548!1.47e-07!679;CL:0000004!1.47e-07!679;CL:0000255!1.47e-07!679;CL:0000012!4.05e-07!682;CL:0002159!6.24e-07!13 | |ontology_enrichment_celltype=CL:0000066!2.62e-15!254;CL:0002076!4.28e-15!43;CL:0000223!5.03e-12!59;CL:0000057!4.73e-11!75;CL:0002251!1.06e-10!21;CL:0000063!2.80e-09!578;CL:0002620!9.75e-09!23;CL:0000548!1.47e-07!679;CL:0000004!1.47e-07!679;CL:0000255!1.47e-07!679;CL:0000012!4.05e-07!682;CL:0002159!6.24e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;2.61e-14;42!CL:0002251;2.42e-11;20!CL:0002159;3.59e-10;14!CL:0002620;1.18e-08;23!CL:0002368;1.86e-08;13!CL:0000154;6.38e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.48e-18,42;CL:0000066,4.81e-18,253;CL:0000223,8.39e-15,58;CL:0002251,2.62e-11,20;CL:0002159,3.59e-10,14;CL:0000057,4.94e-09,76;CL:0002620,1.20e-08,23;CL:0002368,2.30e-08,13;CL:0000076,6.42e-07,63;CL:0000154,6.50e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000223;7.70e-09;58 | |||
|ontology_enrichment_disease=DOID:305!2.70e-09!106;DOID:0050687!8.17e-08!143 | |ontology_enrichment_disease=DOID:305!2.70e-09!106;DOID:0050687!8.17e-08!143 | ||
|ontology_enrichment_disease_v019=DOID:1749;4.54e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.53e-10,106;DOID:0050687,4.21e-08,143;DOID:1749,5.39e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.77e-25!95;UBERON:0004119!3.34e-17!169;UBERON:0000925!3.34e-17!169;UBERON:0006595!3.34e-17!169;UBERON:0001004!3.07e-14!72;UBERON:0001007!7.72e-13!155;UBERON:0001555!7.72e-13!155;UBERON:0007026!7.72e-13!155;UBERON:0002097!1.77e-12!40;UBERON:0002199!1.84e-12!45;UBERON:0002416!1.84e-12!45;UBERON:0000161!1.95e-11!35;UBERON:0000077!5.14e-11!130;UBERON:0004921!1.81e-09!129;UBERON:0004185!1.81e-09!129;UBERON:0000065!2.14e-09!53;UBERON:0004923!2.05e-08!57;UBERON:0003104!3.86e-08!238;UBERON:0009142!3.86e-08!238;UBERON:0000166!4.61e-08!21;UBERON:0000165!6.43e-08!28;UBERON:0000930!6.43e-08!28;UBERON:0001041!6.71e-08!98;UBERON:0000072!2.01e-07!46;UBERON:0001737!6.16e-07!9;UBERON:0001557!9.10e-07!19 | |ontology_enrichment_uberon=UBERON:0003102!1.77e-25!95;UBERON:0004119!3.34e-17!169;UBERON:0000925!3.34e-17!169;UBERON:0006595!3.34e-17!169;UBERON:0001004!3.07e-14!72;UBERON:0001007!7.72e-13!155;UBERON:0001555!7.72e-13!155;UBERON:0007026!7.72e-13!155;UBERON:0002097!1.77e-12!40;UBERON:0002199!1.84e-12!45;UBERON:0002416!1.84e-12!45;UBERON:0000161!1.95e-11!35;UBERON:0000077!5.14e-11!130;UBERON:0004921!1.81e-09!129;UBERON:0004185!1.81e-09!129;UBERON:0000065!2.14e-09!53;UBERON:0004923!2.05e-08!57;UBERON:0003104!3.86e-08!238;UBERON:0009142!3.86e-08!238;UBERON:0000166!4.61e-08!21;UBERON:0000165!6.43e-08!28;UBERON:0000930!6.43e-08!28;UBERON:0001041!6.71e-08!98;UBERON:0000072!2.01e-07!46;UBERON:0001737!6.16e-07!9;UBERON:0001557!9.10e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.29e-11;41!UBERON:0002199;2.12e-10;46!UBERON:0002416;2.12e-10;46!UBERON:0003102;2.80e-10;50!UBERON:0000344;5.17e-09;20!UBERON:0001737;1.03e-08;9!UBERON:0001557;1.03e-08;9!UBERON:0000165;1.52e-08;28!UBERON:0000161;2.51e-08;19!UBERON:0000166;2.51e-08;19!UBERON:0003729;3.16e-08;13!UBERON:0004923;3.80e-08;55!UBERON:0000486;4.77e-08;12!UBERON:0001004;3.05e-07;65!UBERON:0000065;5.03e-07;44!UBERON:0000072;6.88e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.53e-26,99;UBERON:0001004,1.11e-14,74;UBERON:0002097,5.74e-14,41;UBERON:0004119,7.03e-14,160;UBERON:0000925,7.03e-14,160;UBERON:0006595,7.03e-14,160;UBERON:0002199,4.52e-13,46;UBERON:0002416,4.52e-13,46;UBERON:0000161,5.38e-11,36;UBERON:0004923,6.06e-11,66;UBERON:0000166,7.47e-10,22;UBERON:0001007,8.32e-10,145;UBERON:0001555,8.32e-10,145;UBERON:0007026,8.32e-10,145;UBERON:0000065,2.46e-09,54;UBERON:0000344,6.06e-09,20;UBERON:0000165,8.05e-09,29;UBERON:0000930,8.05e-09,29;UBERON:0001737,9.86e-09,9;UBERON:0000072,3.94e-08,47;UBERON:0003729,4.16e-08,13;UBERON:0001557,2.86e-07,19;UBERON:0000033,7.57e-07,56 | |||
|phase1_expression=7.08545679155171,7.92171938396638,4.51054093107108,3.00219895059391,2.68176656656373,9.59572376510406,0,7.58063848112197,0.783556884599516,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,46.8904824484253,44.578475979181,109.077432999202,0,0,0,0.553995408531877,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15076305659177,0.722878304769133,0,0.579386075843295,0,0,0,0,0.087834785693126,0.327447688744282,62.2944942980247,66.3704152584129,0.324547393654683,0,0.398873881556595,0,0,0,0.198762407366705,1.72046919021225,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,76.3164591249435,5.96366342034382,3.54565432660823,5.82600395578163,20.3654000731658,6.38403087957043,1.12135520028461,0,0.49333509683432,0.311211035399766,0.67355336034844,0.163461903113459,0,0,27.4156075245542,0.624320153660641,3.99330275081114,7.32298534703825,3.05329696473789,4.37056949793955,0.140450806702248,3.47062091133319,0.245668634623536,11.0558585858069,1.18800285728205,5.43987244412825,4.55080680969013,5.03032699271367,0.168336113954066,0.125118519871964,2.21651292387346,3.07284334616587,0,0.150238058906597,0.113432183160021,12.1984952268426,24.5590997141353,32.6375127785725,13.5040993237981,23.7020817248409,22.4147269839697,28.1036453060701,5.40084263172052,4.28722822709274,9.08761587278812,15.4643829719063,2.58633690910099,3.90510551768276,0.705264687593482,1.3564847384839,38.4589097794961,27.8201043002651,42.4470801175726,0,0,0.116193942869518,0.414644220061482,0.252320850875628,0,1.56449532329816,8.36213219650751,19.3388889893473,19.5034529773431,37.5377330468185,27.8020980093633,28.6593973132773,27.7162684366004,26.029377564845,27.6706893997356,30.6079098653315,27.5055868646735,28.8445553734259,30.7797725557112,0,0,0,0,2.53510069643662,1.96565443335525,0,0,1.59884970106048,0,184.929230913534,140.502191572024,90.2750172256445,78.144647713799,10.4258657699304,2.07986957055916,0,0,0.234817388471643,0,0,0,0,0,0,0,0,39.3682102744463,95.7498130733499,36.8615252830205,18.896848290301,66.5551719196973,9.96794965829549,0,0,0,0.144119953416961,0.12624243342638,0.126995788584338,0,0,1.71072446022705,0.205654985406647,0,0,0,0.43596006883328,0.1466765716419,0.387815147273333,3.57656445851882,0.845302752556,2.12750493267896,0,0.257207374262142,0,0,4.43231780340257,7.05408087008876,1.64648067356154,0.325736184293735,3.19852753868291,0.791951872933429,0.602878754119172,1.74306691720059,0,0,0,0,0.239624855491583,0,0,2.02693829334611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.271265023699736,0,0.535286966391485,0.473107245101804,1.05427273493442,3.31040709700491,4.5481500811197,2.0694614258501,0.664225598535437,0,0.260650843404249,0,0,0,0,0,0.303127571446259,1.66435439510497,0.907170879989041,15.3826840847642,20.2569804740242,12.3490441550552,9.99485364194467,11.7692667285342,3.69964018630297,5.93672265779964,0.308419387605311,2.13074070375753,0.98552587216571,1.55776328755086,0.116210378459959,1.93375119346596,21.4541923224515,83.9778619095375,2.29628896329214,0.910455840033585,1.31124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.976135183992909,2.26690225624989,0.824125183365091,0.660075999364704,89.0111583894067,123.511446746939,3.21367859688319,0.870036464629098,0.308097234229289,0.307007349452259,0,3.54486808065303,0.435050081742686,0.0852266274161009,0.356128142586949,125.12068092826,52.2756983233089,19.1419068741876,33.3820676823315,8.36721988735114,16.9998667288546,0,1.23213432070436,0,0.869932992075073,0.18532421910392,0.286249773483982,0,0.632758849437452,0.762520775695299,0.511795582622668,9.84259672478017,1.90921948755562,0,0.539617372749944,0.274537029736055,0.471249609382746,1.81964233415984,0,0,0,4.6305563029944,0,0.409499734223957,0.848432591722276,1.13008116620243,1.65409603063837,0,0.438450885253763,0,0.655894752046633,0,0.6196469961995,0.281695602532241,0.143411352204052,1.76848273823618,0,0,3.16661452946496,10.8667314676768,0.379473173765715,2.0996083214699,115.081646819712,80.4362730642945,75.1347795543126,3.10674542563371,19.3727417702053,64.0191607536977,32.813831361714,19.0670422171776,0,0,0,0,0,0,0,0,0.213648142254946,0,77.9227886819681,0,0,0.0711418433484141,0,0,0,0.423347165447766,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,2.99424864653152,1.17206543417515,0,0,0,2.14870036263921,0.296964680832639,0,0,0,0,0,0,1.79323189425963,0,0,0,0,1.24415835064723,0.449341755736634,4.65455054156584,0,0.690503839458535,0,0,0,0,0,0,0,0.724999575434793,1.365521379426,1.01701460117107,4.25497827182285,0,0.874813840149763,0,0,0,0,0,0,0,81.5949091757236,243.155010021884,16.1595542857974,0,8.0697366535821,18.5798323928228,1.19512109114209,7.33702667383415,6.68662431833595,12.2597998484286,0,0,0,0.902382642468723,1.37243774022418,1.51039428278258,0.37950746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| ||
|short_description=p1@IL20RB | |short_description=p1@IL20RB | ||
}} | }} |
Latest revision as of 00:18, 25 September 2015
Short description: | p1@IL20RB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IL20RB_5end |
Coexpression cluster: | C2720_salivary_cervical_epidermoid_malignant_Keratinocyte_Small_Sebocyte |
Association with transcript: | -10bp_to_ENST00000309741, ENST00000469964_5end |
EntrezGene: | IL20RB |
HGNC: | 6004 |
UniProt: | Q8IYY5F8WC67 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 4.48e-18 | 42 |
epithelial cell | 4.81e-18 | 253 |
endodermal cell | 8.39e-15 | 58 |
epithelial cell of alimentary canal | 2.62e-11 | 20 |
general ecto-epithelial cell | 3.59e-10 | 14 |
fibroblast | 4.94e-09 | 76 |
skin fibroblast | 1.20e-08 | 23 |
respiratory epithelial cell | 2.30e-08 | 13 |
squamous epithelial cell | 6.42e-07 | 63 |
protein secreting cell | 6.50e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.53e-26 | 99 |
respiratory system | 1.11e-14 | 74 |
skin of body | 5.74e-14 | 41 |
endoderm-derived structure | 7.03e-14 | 160 |
endoderm | 7.03e-14 | 160 |
presumptive endoderm | 7.03e-14 | 160 |
integument | 4.52e-13 | 46 |
integumental system | 4.52e-13 | 46 |
orifice | 5.38e-11 | 36 |
organ component layer | 6.06e-11 | 66 |
oral opening | 7.47e-10 | 22 |
digestive system | 8.32e-10 | 145 |
digestive tract | 8.32e-10 | 145 |
primitive gut | 8.32e-10 | 145 |
respiratory tract | 2.46e-09 | 54 |
mucosa | 6.06e-09 | 20 |
mouth | 8.05e-09 | 29 |
stomodeum | 8.05e-09 | 29 |
larynx | 9.86e-09 | 9 |
segment of respiratory tract | 3.94e-08 | 47 |
mouth mucosa | 4.16e-08 | 13 |
upper respiratory tract | 2.86e-07 | 19 |
head | 7.57e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.53e-10 | 106 |
cell type cancer | 4.21e-08 | 143 |
squamous cell carcinoma | 5.39e-08 | 14 |