FFCP PHASE1:Hg19::chr17:43180160..43180169,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4836 | |EntrezGene=4836 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7857 | |HGNC=7857 | ||
|TSSclassifier=strong | |||
|UniProt=A4FU65 | |UniProt=A4FU65 | ||
|association_with_transcript=-149bp_to_uc010dad.1_5end | |association_with_transcript=-149bp_to_uc010dad.1_5end | ||
|cluster_id=chr17:43180160..43180169,+ | |||
|description=CAGE_peak_5_at_NMT1_5end | |description=CAGE_peak_5_at_NMT1_5end | ||
|id=chr17:43180160..43180169,+ | |id=chr17:43180160..43180169,+ | ||
|ontology_enrichment_celltype=CL:0002541!3.94e-13!3;CL:0000066!7.71e-11!254;CL:0000197!8.64e-11!6;CL:0000098!8.64e-11!6;CL:0002167!8.64e-11!6;CL:0002536!3.47e-09!2;CL:0000039!6.15e-09!7;CL:0000586!6.15e-09!7 | |ontology_enrichment_celltype=CL:0002541!3.94e-13!3;CL:0000066!7.71e-11!254;CL:0000197!8.64e-11!6;CL:0000098!8.64e-11!6;CL:0002167!8.64e-11!6;CL:0002536!3.47e-09!2;CL:0000039!6.15e-09!7;CL:0000586!6.15e-09!7 | ||
|ontology_enrichment_celltype_v019=CL:0000349;6.59e-22;19!CL:0002541;4.51e-17;3!CL:0002577;1.88e-16;3!CL:0000197;1.08e-08;6!CL:0000098;1.08e-08;6!CL:0002167;1.08e-08;6!CL:1000415;2.58e-07;2!CL:0002536;4.04e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.60e-22,19;CL:0002541,4.17e-17,3;CL:0002577,2.20e-16,3;CL:0000197,1.26e-08,6;CL:0000098,1.26e-08,6;CL:0002167,1.26e-08,6;CL:1000415,2.58e-07,2;CL:0002536,4.69e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5093!2.21e-16!4;DOID:1612!2.21e-16!4;DOID:305!3.11e-11!106;DOID:0050687!5.75e-10!143 | |ontology_enrichment_disease=DOID:5093!2.21e-16!4;DOID:1612!2.21e-16!4;DOID:305!3.11e-11!106;DOID:0050687!5.75e-10!143 | ||
|ontology_enrichment_disease_v019=DOID:1799;5.70e-13;1!DOID:10165;5.70e-13;1!DOID:1798;5.70e-13;1!DOID:5093;1.39e-12;4!DOID:1612;1.39e-12;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.03e-12,4;DOID:1612,1.03e-12,4;DOID:1799,1.09e-12,1;DOID:10165,1.09e-12,1;DOID:1798,1.09e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.06e-34!9;UBERON:0005631!3.13e-27!14;UBERON:0000158!3.13e-27!14;UBERON:0003124!2.15e-20!7;UBERON:0001557!1.53e-15!19;UBERON:0000478!5.02e-15!24;UBERON:0000476!3.94e-13!3;UBERON:0000920!3.94e-13!3;UBERON:0000305!1.31e-09!7;UBERON:0001987!1.67e-09!4;UBERON:0004340!1.67e-09!4;UBERON:0008947!1.57e-08!38;UBERON:0003258!1.57e-08!38;UBERON:0004871!2.08e-08!8;UBERON:0004923!1.31e-07!57;UBERON:0004175!9.21e-07!25 | |ontology_enrichment_uberon=UBERON:0001737!1.06e-34!9;UBERON:0005631!3.13e-27!14;UBERON:0000158!3.13e-27!14;UBERON:0003124!2.15e-20!7;UBERON:0001557!1.53e-15!19;UBERON:0000478!5.02e-15!24;UBERON:0000476!3.94e-13!3;UBERON:0000920!3.94e-13!3;UBERON:0000305!1.31e-09!7;UBERON:0001987!1.67e-09!4;UBERON:0004340!1.67e-09!4;UBERON:0008947!1.57e-08!38;UBERON:0003258!1.57e-08!38;UBERON:0004871!2.08e-08!8;UBERON:0004923!1.31e-07!57;UBERON:0004175!9.21e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;3.40e-19;10!UBERON:0000158;3.40e-19;10!UBERON:0000478;2.74e-17;24!UBERON:0003124;4.51e-17;3!UBERON:0000920;4.51e-17;3!UBERON:0001987;1.39e-12;4!UBERON:0000305;1.42e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,8.30e-30,14;UBERON:0000158,8.30e-30,14;UBERON:0003124,3.11e-27,7;UBERON:0000478,2.75e-17,24;UBERON:0000920,4.17e-17,3;UBERON:0001987,1.56e-12,4;UBERON:0004340,1.56e-12,4;UBERON:0000305,1.38e-07,7;UBERON:0004871,9.66e-07,8 | |||
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| ||
|short_description=p5@NMT1 | |short_description=p5@NMT1 | ||
}} | }} |
Latest revision as of 00:27, 25 September 2015
Short description: | p5@NMT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NMT1_5end |
Coexpression cluster: | NA |
Association with transcript: | -149bp_to_uc010dad.1_5end |
EntrezGene: | NMT1 |
HGNC: | 7857 |
UniProt: | A4FU65 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.60e-22 | 19 |
chorionic membrane mesenchymal stem cell | 4.17e-17 | 3 |
placental epithelial cell | 2.20e-16 | 3 |
receptor cell | 1.26e-08 | 6 |
sensory epithelial cell | 1.26e-08 | 6 |
olfactory epithelial cell | 1.26e-08 | 6 |
epithelial cell of gall bladder | 2.58e-07 | 2 |
amniotic epithelial cell | 4.69e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 8.30e-30 | 14 |
membranous layer | 8.30e-30 | 14 |
chorion | 3.11e-27 | 7 |
extraembryonic structure | 2.75e-17 | 24 |
egg chorion | 4.17e-17 | 3 |
placenta | 1.56e-12 | 4 |
allantois | 1.56e-12 | 4 |
amnion | 1.38e-07 | 7 |
somatic layer of lateral plate mesoderm | 9.66e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.03e-12 | 4 |
breast cancer | 1.03e-12 | 4 |
islet cell tumor | 1.09e-12 | 1 |
endocrine pancreas cancer | 1.09e-12 | 1 |
pancreatic endocrine carcinoma | 1.09e-12 | 1 |