FFCP PHASE1:Hg19::chr9:127269661..127269719,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2516 | |EntrezGene=2516 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7983 | |HGNC=7983 | ||
|TSSclassifier=strong | |||
|UniProt=Q13285,F1D8R8 | |UniProt=Q13285,F1D8R8 | ||
|association_with_transcript=0bp_to_ENST00000373588,NM_004959,uc004boo.1_5end | |association_with_transcript=0bp_to_ENST00000373588,NM_004959,uc004boo.1_5end | ||
|cluster_id=chr9:127269661..127269719,- | |||
|description=CAGE_peak_1_at_NR5A1_5end | |description=CAGE_peak_1_at_NR5A1_5end | ||
|id=chr9:127269661..127269719,- | |id=chr9:127269661..127269719,- | ||
Latest revision as of 00:49, 25 September 2015
| Short description: | p1@NR5A1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_NR5A1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000373588, NM_004959, uc004boo.1_5end |
| EntrezGene: | NR5A1 |
| HGNC: | 7983 |
| UniProt: | Q13285F1D8R8 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@NR5A1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hepatocyte | 5.01e-19 | 12 |
| androgen binding protein secreting cell | 1.57e-10 | 1 |
| seminiferous tubule epithelial cell | 1.57e-10 | 1 |
| Sertoli cell | 1.57e-10 | 1 |
| follicular cell of ovary | 1.89e-10 | 1 |
| granulosa cell | 1.89e-10 | 1 |
Showing 1 to 6 of 6 entries
| Ontology term | p-value | n |
|---|---|---|
| gonad | 5.34e-50 | 21 |
| indifferent external genitalia | 5.34e-50 | 21 |
| indifferent gonad | 5.34e-50 | 21 |
| gonad primordium | 5.34e-50 | 21 |
| external genitalia | 1.17e-47 | 22 |
| female gonad | 6.25e-43 | 13 |
| body cavity | 3.66e-31 | 46 |
| body cavity or lining | 3.94e-29 | 49 |
| right ovary | 7.13e-29 | 5 |
| body cavity precursor | 3.04e-26 | 54 |
Showing 1 to 10 of 71 entries
| Ontology term | p-value | n |
|---|---|---|
| ovarian cancer | 2.15e-30 | 14 |
| reproductive organ cancer | 1.07e-18 | 29 |
| female reproductive organ cancer | 1.86e-15 | 27 |
Showing 1 to 3 of 3 entries
