FFCP PHASE1:Hg19::chr4:123747834..123747839,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2247 | |EntrezGene=2247 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3676 | |HGNC=3676 | ||
|TSSclassifier=strong | |||
|UniProt=P09038 | |UniProt=P09038 | ||
|association_with_transcript=-23bp_to_ENST00000264498,NM_002006,uc003iev.1_5end | |association_with_transcript=-23bp_to_ENST00000264498,NM_002006,uc003iev.1_5end | ||
|cluster_id=chr4:123747834..123747839,+ | |||
|description=CAGE_peak_1_at_FGF2_5end | |description=CAGE_peak_1_at_FGF2_5end | ||
|id=chr4:123747834..123747839,+ | |id=chr4:123747834..123747839,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.28e-11!180;CL:0000057!6.88e-08!75 | |ontology_enrichment_celltype=CL:0000055!2.28e-11!180;CL:0000057!6.88e-08!75 | ||
|ontology_enrichment_celltype_v019=CL:0002322;8.51e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.20e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.12e-12!365;UBERON:0000481!4.46e-12!347;UBERON:0000073!2.31e-11!94;UBERON:0001016!2.31e-11!94;UBERON:0005743!3.54e-11!86;UBERON:0003075!5.54e-10!86;UBERON:0007284!5.54e-10!86;UBERON:0001017!9.38e-10!82;UBERON:0000477!3.24e-09!286;UBERON:0002346!6.25e-09!90;UBERON:0007023!2.49e-08!115;UBERON:0000955!4.81e-08!69;UBERON:0006238!4.81e-08!69;UBERON:0004121!7.78e-08!169;UBERON:0001049!8.33e-08!57;UBERON:0005068!8.33e-08!57;UBERON:0006241!8.33e-08!57;UBERON:0007135!8.33e-08!57;UBERON:0002616!1.30e-07!59;UBERON:0000119!1.31e-07!312;UBERON:0000468!1.48e-07!659;UBERON:0000483!2.04e-07!309;UBERON:0000924!3.06e-07!173;UBERON:0006601!3.06e-07!173;UBERON:0000033!3.59e-07!123 | |ontology_enrichment_uberon=UBERON:0000475!1.12e-12!365;UBERON:0000481!4.46e-12!347;UBERON:0000073!2.31e-11!94;UBERON:0001016!2.31e-11!94;UBERON:0005743!3.54e-11!86;UBERON:0003075!5.54e-10!86;UBERON:0007284!5.54e-10!86;UBERON:0001017!9.38e-10!82;UBERON:0000477!3.24e-09!286;UBERON:0002346!6.25e-09!90;UBERON:0007023!2.49e-08!115;UBERON:0000955!4.81e-08!69;UBERON:0006238!4.81e-08!69;UBERON:0004121!7.78e-08!169;UBERON:0001049!8.33e-08!57;UBERON:0005068!8.33e-08!57;UBERON:0006241!8.33e-08!57;UBERON:0007135!8.33e-08!57;UBERON:0002616!1.30e-07!59;UBERON:0000119!1.31e-07!312;UBERON:0000468!1.48e-07!659;UBERON:0000483!2.04e-07!309;UBERON:0000924!3.06e-07!173;UBERON:0006601!3.06e-07!173;UBERON:0000033!3.59e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0000991;1.72e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000991,9.01e-08,21;UBERON:0009196,9.01e-08,21;UBERON:0009117,9.01e-08,21;UBERON:0005564,9.01e-08,21;UBERON:0004176,2.79e-07,22;UBERON:0005156,4.21e-07,59;UBERON:0000990,4.21e-07,59;UBERON:0002298,7.97e-07,6 | |||
|phase1_expression=0,1.07050261945492,0.845726424575827,0,0.446961094427288,1.74467704820074,0,0.631719873426831,0.261185628199839,0.245733936501509,0.697801167972428,0,0,0.618831764800233,0.994192127183747,0.672325146451775,0,0,0.975865597581014,0.246242116153576,0.408001382488506,0,0.286235987131057,0.684372125364421,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.639312809217652,0.361439152384566,1.00267582127178,0.434539556882471,0.795285947051099,0.486634870302636,0.283604451492204,0.665188192387692,0.43917392846563,0.523916301990851,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0.402829317109147,0,0.24406205754817,0,0.81014194788176,0.625098097988558,0.44905874525234,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.633152558322899,0.794455084879313,0.860509862246441,0.354668382198357,0.560677600142307,0,0.74000264525148,0,0.269421344139376,0.326923806226917,1.36221684880438,0,1.17160715916898,0.312160076830321,0,0.448346041655403,0.822041490506354,0.971237666208789,0.561803226808994,1.22492502752936,0.859840221182376,0.826606249406124,0,2.22540236350701,0,0,1.34668891163253,1.12606667884768,0.831192346452549,0,1.83892677479412,0.901428353439581,0.567160915800105,1.07633781413317,1.49490172172997,1.27159140695737,0.300091096084402,2.16410311400722,1.8034837803194,0.930584281657949,1.18143432568886,0.68205903612839,0.504867548488229,1.56484827691909,1.13152239773168,2.13005755509969,0.806016785821122,0.67824236924195,0.193260853163297,0.272746120590835,0,3.53723747775827,2.78312513475119,2.5562667431294,2.17688215532278,1.7662459561294,3.6497735907583,0,1.28648187638577,0,1.39310378409594,0.721879481669586,0.946454400318751,0.337169380156203,0.482022059766964,0.882351781859152,0.871517776369625,1.18635309555548,0.269662616320329,0.392442930250692,1.53898862778556,0,0,0,0,0,1.96565443335525,0,0,0,0.686271241194102,0,0,0,0.370353780634118,0.325808305310325,0,1.44331342025273,0.231860809950154,0.469634776943287,0.144366447761074,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0.567100388969546,0.447792613514241,1.16253575405585,0.383382679165211,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.80672114403045,0.646358578788889,0,0.845302752556,0.797814349754612,1.04007436911366,0.257207374262142,1.41849132023278,0.799266537048298,1.14382394926518,0.542621605391443,1.64648067356154,0.325736184293735,1.42156779497018,1.58390374586686,0.602878754119172,0,0.799783929456456,0,0,0,0.479249710983165,1.14861935834114,0,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0,0.508189248444927,0,0.773288812777695,0.167516265334349,0,0,0,0.414415513436035,0.613457458595699,0.500170521059677,0.813795071099207,0.623912584592421,1.24900292158013,0.630809660135739,1.17141414992713,0.300946099727719,0,1.03473071292505,0,0.737476674166813,1.21637060255316,0.391602314925481,0.343143423810856,0,0,0,0,0,0,0.248107807818777,1.38115775959256,0.841980283299221,1.02511319404561,1.02341449813341,0.321707842287215,0,1.54209693802656,0.532685175939381,0.492762936082855,1.03850885836724,0.697262270759755,0,0,1.19705285616665,1.49258782613989,1.0925470080403,0.655622074797121,0.451199612907412,1.46329140498388,0.784349769176855,0,0.633309773357254,1.13733384070897,0.170093705276516,0.215915916102139,0,0.812839312631559,0.501689773854853,0.764628819135115,1.66215201785745,1.11937377361089,0,0,1.79515087581472,0.656029291399411,2.60302715731442,0.412164046590889,0,0,0,0,1.6068392984416,0.773365746336976,0.616194468458578,0.614014698904518,0.137836572484531,0.429680979473094,0.725083469571143,0.255679882248303,0.267096106940212,0.165284915360978,0.192190067365106,0,0.809262246844399,2.32422774648643,0.62962469366128,1.3940745403212,0,0.532306030317022,0.869932992075073,0.55597265731176,1.14499909393593,1.116475108079,1.89827654831236,0.190630193923825,1.02359116524534,0.855877976067841,0.636406495851874,0,0.899362287916574,0.823611089208164,0.235624804691373,0.404364963146632,0,0.421258456238981,1.46290121726877,0.974853958525138,1.05650146756755,1.22849920267187,0.707027159768564,1.13008116620243,0.551365343546124,0.66343897524122,0,1.15755106853338,0,0.202910376962704,0.30982349809975,0,1.14729081763241,0.687743287091848,1.07001315444375,0.354761064070598,0.633322905892992,0.987884678879706,0,0.349934720244983,0.288666338176536,0,0,0.753150406214233,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,1.06824071127473,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,1.61158997199083,0.728163130497081,0,0,0,0.296964680832639,0,1.9882952955326,0.562677665642051,0.445234820091624,0,0,0.996239941255349,1.38141957765574,0,1.43176155503017,0.369254416383208,0.622079175323615,1.16828856491525,0,0,2.26879832964947,0,0,0.969332746095218,0.9276809816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| ||
|short_description=p1@FGF2 | |short_description=p1@FGF2 | ||
}} | }} |
Latest revision as of 01:00, 25 September 2015
Short description: | p1@FGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FGF2_5end |
Coexpression cluster: | NA |
Association with transcript: | -23bp_to_ENST00000264498, NM_002006, uc003iev.1_5end |
EntrezGene: | FGF2 |
HGNC: | 3676 |
UniProt: | P09038 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.20e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
gonad | 9.01e-08 | 21 |
indifferent external genitalia | 9.01e-08 | 21 |
indifferent gonad | 9.01e-08 | 21 |
gonad primordium | 9.01e-08 | 21 |
external genitalia | 2.79e-07 | 22 |
reproductive structure | 4.21e-07 | 59 |
reproductive system | 4.21e-07 | 59 |
brainstem | 7.97e-07 | 6 |