FFCP PHASE2:Hg19::chr14:64932162..64932175,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:9495 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:375 |TSSclassi...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=9495 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=375 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=A2RRB8,P24588,Q6PG46 | ||
|association_with_transcript=-41bp_to_ENST00000394718,NM_004857,uc001xhd.3_5end | |association_with_transcript=-41bp_to_ENST00000394718,NM_004857,uc001xhd.3_5end | ||
|cluster_id=chr14:64932162..64932175,+ | |cluster_id=chr14:64932162..64932175,+ |
Latest revision as of 01:21, 25 September 2015
Short description: | p4@AKAP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AKAP5_5end |
Coexpression cluster: | C3443_amygdala_putamen_caudate_Dendritic_medulloblastoma_occipital_medial |
Association with transcript: | -41bp_to_ENST00000394718, NM_004857, uc001xhd.3_5end |
EntrezGene: | AKAP5 |
HGNC: | 375 |
UniProt: | A2RRB8P24588Q6PG46 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@AKAP5 |
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0.0
2.5
5.0
7.5
10.0
12.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.80e-21 | 5 |
basophil mast progenitor cell | 1.80e-21 | 5 |
endocrine cell | 7.79e-12 | 9 |
immature conventional dendritic cell | 9.89e-08 | 5 |
common dendritic progenitor | 9.89e-08 | 5 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
---|---|---|
regional part of telencephalon | 1.07e-49 | 32 |
cerebral hemisphere | 1.07e-49 | 32 |
brain grey matter | 1.41e-46 | 34 |
gray matter | 1.41e-46 | 34 |
telencephalon | 1.41e-46 | 34 |
regional part of forebrain | 1.71e-46 | 41 |
forebrain | 1.71e-46 | 41 |
anterior neural tube | 1.71e-46 | 41 |
future forebrain | 1.71e-46 | 41 |
regional part of cerebral cortex | 9.38e-40 | 22 |
Showing 1 to 10 of 63 entries