FFCP PHASE1:Hg19::chr1:214776516..214776565,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1063 | |EntrezGene=1063 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1857 | |HGNC=1857 | ||
|TSSclassifier=strong | |||
|UniProt=P49454 | |UniProt=P49454 | ||
|association_with_transcript=0bp_to_ENST00000366955,ENST00000464322,NM_016343,uc001hkm.2_5end | |association_with_transcript=0bp_to_ENST00000366955,ENST00000464322,NM_016343,uc001hkm.2_5end | ||
|cluster_id=chr1:214776516..214776565,+ | |||
|coexpression_cluster_id=C109 | |coexpression_cluster_id=C109 | ||
|description=CAGE_peak_1_at_CENPF_5end | |description=CAGE_peak_1_at_CENPF_5end | ||
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|ontology_enrichment_celltype=CL:0000066!6.89e-13!254;CL:0000012!5.00e-10!682;CL:0000548!6.37e-10!679;CL:0000004!6.37e-10!679;CL:0000255!6.37e-10!679;CL:0002319!2.65e-08!25;CL:0000095!2.65e-07!17;CL:0000123!2.65e-07!17;CL:0000133!3.25e-07!59;CL:0000333!6.86e-07!41 | |ontology_enrichment_celltype=CL:0000066!6.89e-13!254;CL:0000012!5.00e-10!682;CL:0000548!6.37e-10!679;CL:0000004!6.37e-10!679;CL:0000255!6.37e-10!679;CL:0002319!2.65e-08!25;CL:0000095!2.65e-07!17;CL:0000123!2.65e-07!17;CL:0000133!3.25e-07!59;CL:0000333!6.86e-07!41 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.84e-08;25!CL:0000095;2.21e-07;17 | |ontology_enrichment_celltype_v019=CL:0002319;1.84e-08;25!CL:0000095;2.21e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.03e-13,253;CL:0002319,2.14e-08,25;CL:0000095,2.21e-07,17;CL:0000123,2.21e-07,17;CL:0000133,2.68e-07,59;CL:0000333,5.71e-07,41 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!5.95e-64!235;DOID:14566!1.18e-62!239;DOID:0050687!6.18e-34!143;DOID:0050686!1.40e-30!137;DOID:305!4.09e-24!106;DOID:2531!2.25e-19!51;DOID:0060083!2.25e-19!51;DOID:1240!6.44e-16!39;DOID:8692!8.56e-13!31;DOID:3095!1.38e-09!22;DOID:2994!1.38e-09!22;DOID:7!2.99e-07!39 | |ontology_enrichment_disease=DOID:162!5.95e-64!235;DOID:14566!1.18e-62!239;DOID:0050687!6.18e-34!143;DOID:0050686!1.40e-30!137;DOID:305!4.09e-24!106;DOID:2531!2.25e-19!51;DOID:0060083!2.25e-19!51;DOID:1240!6.44e-16!39;DOID:8692!8.56e-13!31;DOID:3095!1.38e-09!22;DOID:2994!1.38e-09!22;DOID:7!2.99e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:1240;4.34e-13;39!DOID:8692;1.26e-12;31!DOID:2531;2.38e-12;51!DOID:0060083;2.38e-12;51!DOID:3095;1.06e-09;22!DOID:2994;1.06e-09;22!DOID:0050687;1.37e-08;143!DOID:14566;6.89e-08;239!DOID:305;1.07e-07;106!DOID:0050686;1.08e-07;137!DOID:162;1.19e-07;235 | |ontology_enrichment_disease_v019=DOID:1240;4.34e-13;39!DOID:8692;1.26e-12;31!DOID:2531;2.38e-12;51!DOID:0060083;2.38e-12;51!DOID:3095;1.06e-09;22!DOID:2994;1.06e-09;22!DOID:0050687;1.37e-08;143!DOID:14566;6.89e-08;239!DOID:305;1.07e-07;106!DOID:0050686;1.08e-07;137!DOID:162;1.19e-07;235 | ||
|ontology_enrichment_disease_v019_2=DOID:162,2.18e-64,235;DOID:14566,3.85e-63,239;DOID:0050687,3.41e-34,143;DOID:0050686,1.26e-30,137;DOID:305,3.02e-24,106;DOID:2531,1.28e-19,51;DOID:0060083,1.28e-19,51;DOID:1240,4.09e-16,39;DOID:8692,6.01e-13,31;DOID:3095,1.07e-09,22;DOID:2994,1.07e-09,22;DOID:7,1.99e-07,39 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@CENPF | |short_description=p1@CENPF | ||
}} | }} |
Latest revision as of 01:55, 25 September 2015
Short description: | p1@CENPF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CENPF_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000366955, ENST00000464322, NM_016343, uc001hkm.2_5end |
EntrezGene: | CENPF |
HGNC: | 1857 |
UniProt: | P49454 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.03e-13 | 253 |
neural cell | 2.14e-08 | 25 |
neuron associated cell | 2.21e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 2.21e-07 | 17 |
neurectodermal cell | 2.68e-07 | 59 |
migratory neural crest cell | 5.71e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.18e-64 | 235 |
disease of cellular proliferation | 3.85e-63 | 239 |
cell type cancer | 3.41e-34 | 143 |
organ system cancer | 1.26e-30 | 137 |
carcinoma | 3.02e-24 | 106 |
hematologic cancer | 1.28e-19 | 51 |
immune system cancer | 1.28e-19 | 51 |
leukemia | 4.09e-16 | 39 |
myeloid leukemia | 6.01e-13 | 31 |
germ cell and embryonal cancer | 1.07e-09 | 22 |
germ cell cancer | 1.07e-09 | 22 |
disease of anatomical entity | 1.99e-07 | 39 |