FFCP PHASE1:Hg19::chr22:45072983..45072995,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55615 | |EntrezGene=55615 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31682 | |HGNC=31682 | ||
|TSSclassifier=strong | |||
|UniProt=B1AHF6 | |UniProt=B1AHF6 | ||
|association_with_transcript=18bp_to_,-18bp_to_ENST00000403581,ENST00000459857,ENST00000492289_5end | |association_with_transcript=18bp_to_,-18bp_to_ENST00000403581,ENST00000459857,ENST00000492289_5end | ||
|cluster_id=chr22:45072983..45072995,+ | |||
|coexpression_cluster_id=C276 | |coexpression_cluster_id=C276 | ||
|description=CAGE_peak_9_at_PRR5_5end | |description=CAGE_peak_9_at_PRR5_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002563;6.83e-10;4!CL:0000182;1.57e-07;12 | |ontology_enrichment_celltype_v019=CL:0002563;6.83e-10;4!CL:0000182;1.57e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.46e-10,4;CL:0000182,1.52e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0003104;7.89e-14;31!UBERON:0004161;1.25e-13;11!UBERON:0009497;1.45e-11;13 | |ontology_enrichment_development_v019=UBERON:0003104;7.89e-14;31!UBERON:0004161;1.25e-13;11!UBERON:0009497;1.45e-11;13 | ||
|ontology_enrichment_disease=DOID:8692!2.99e-11!31;DOID:1036!5.42e-11!8;DOID:2531!1.03e-10!51;DOID:0060083!1.03e-10!51;DOID:1240!5.59e-10!39 | |ontology_enrichment_disease=DOID:8692!2.99e-11!31;DOID:1036!5.42e-11!8;DOID:2531!1.03e-10!51;DOID:0060083!1.03e-10!51;DOID:1240!5.59e-10!39 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001242;6.83e-10;4!UBERON:0001262;6.83e-10;4!UBERON:0004786;6.83e-10;4!UBERON:0004808;6.83e-10;4!UBERON:0001277;6.83e-10;4!UBERON:0000160;3.70e-08;17!UBERON:0002108;4.37e-08;4!UBERON:0002107;5.81e-08;19!UBERON:0006925;5.81e-08;19 | |ontology_enrichment_uberon_v019=UBERON:0001242;6.83e-10;4!UBERON:0001262;6.83e-10;4!UBERON:0004786;6.83e-10;4!UBERON:0004808;6.83e-10;4!UBERON:0001277;6.83e-10;4!UBERON:0000160;3.70e-08;17!UBERON:0002108;4.37e-08;4!UBERON:0002107;5.81e-08;19!UBERON:0006925;5.81e-08;19 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,5.46e-10,4;UBERON:0001262,5.46e-10,4;UBERON:0004786,5.46e-10,4;UBERON:0004808,5.46e-10,4;UBERON:0001277,5.46e-10,4;UBERON:0000160,3.24e-08,17;UBERON:0002108,4.07e-08,4;UBERON:0002107,5.55e-08,19;UBERON:0006925,5.55e-08,19;UBERON:0008836,5.55e-08,19;UBERON:0003929,1.37e-07,54;UBERON:0008835,6.56e-07,22;UBERON:0003894,6.56e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764134057479513,1.14940825229924,1.02324015707783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6019245761871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47586126251736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264145302039678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1754700926492,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3071772551245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,1.13929437434833,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0.383010740264733,0,0,0.280797178113459,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,1.11362469558097,0,0.540911356951966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0.251932747854276,0,0.369254416383208,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0.225595660617181,0.19606253431774,0.167821586975843,0.37950746544837,0.317873157960757,0.421996129056054,0,1.55488378577335,0,0,0.442287822516696,0.611030144933625,0.593042257361244,0.741383633679017,1.8795950910982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.77508995296322,0,0,0,0,0,0,0,0,0,0,0,2.10309883423452,0,0,0,0,0,0,0,0,0,2.28471228690949,2.63730746819733,2.42652757875066,0.492137407573744,0.254019996197353,0,0,0,0,0,0,0,0,0,2.99461687736953,1.94081976099493,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,1.32506888912221,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8370420037491,0,0,0,0,0,0,0,0.737318726261158,0,0.19998739585493,0,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0.606965604236632,0,0,0.230467975111559,0,0.135939465953663,0,0,0,0,0,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,1.15761237161917,1.74847648403166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764134057479513,1.14940825229924,1.02324015707783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6019245761871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47586126251736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264145302039678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1754700926492,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3071772551245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,1.13929437434833,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0.383010740264733,0,0,0.280797178113459,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,1.11362469558097,0,0.540911356951966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0.251932747854276,0,0.369254416383208,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0.225595660617181,0.19606253431774,0.167821586975843,0.37950746544837,0.317873157960757,0.421996129056054,0,1.55488378577335,0,0,0.442287822516696,0.611030144933625,0.593042257361244,0.741383633679017,1.8795950910982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.77508995296322,0,0,0,0,0,0,0,0,0,0,0,2.10309883423452,0,0,0,0,0,0,0,0,0,2.28471228690949,2.63730746819733,2.42652757875066,0.492137407573744,0.254019996197353,0,0,0,0,0,0,0,0,0,2.99461687736953,1.94081976099493,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,1.32506888912221,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8370420037491,0,0,0,0,0,0,0,0.737318726261158,0,0.19998739585493,0,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0.606965604236632,0,0,0.230467975111559,0,0.135939465953663,0,0,0,0,0,0,0,0.215927591218621,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,1.15761237161917,1.74847648403166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p9@PRR5 | |short_description=p9@PRR5 | ||
}} | }} |
Latest revision as of 03:08, 25 September 2015
Short description: | p9@PRR5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PRR5_5end |
Coexpression cluster: | C276_mesothelioma_kidney_renal_small_clear_cerebellum_Renal |
Association with transcript: | 18bp_to_, -18bp_to_ENST00000403581, ENST00000459857, ENST00000492289_5end |
EntrezGene: | PRR5 |
HGNC: | 31682 |
UniProt: | B1AHF6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.46e-10 | 4 |
hepatocyte | 1.52e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 5.46e-10 | 4 |
wall of intestine | 5.46e-10 | 4 |
gastrointestinal system mucosa | 5.46e-10 | 4 |
gastrointestinal system epithelium | 5.46e-10 | 4 |
intestinal epithelium | 5.46e-10 | 4 |
intestine | 3.24e-08 | 17 |
small intestine | 4.07e-08 | 4 |
liver | 5.55e-08 | 19 |
digestive gland | 5.55e-08 | 19 |
liver bud | 5.55e-08 | 19 |
gut epithelium | 1.37e-07 | 54 |
hepatic diverticulum | 6.56e-07 | 22 |
liver primordium | 6.56e-07 | 22 |