FFCP PHASE1:Hg19::chr20:31368212..31368235,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1789 | |EntrezGene=1789 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2979 | |HGNC=2979 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=83bp_to_AB527132,BC111933,BC118502_5end | |association_with_transcript=83bp_to_AB527132,BC111933,BC118502_5end | ||
|cluster_id=chr20:31368212..31368235,+ | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_2_at_DNMT3B_5end | |description=CAGE_peak_2_at_DNMT3B_5end | ||
|id=chr20:31368212..31368235,+ | |id=chr20:31368212..31368235,+ | ||
|ontology_enrichment_celltype=CL:0002322!9.55e-17!5;CL:0000039!6.64e-16!7;CL:0000586!6.64e-16!7 | |ontology_enrichment_celltype=CL:0002322!9.55e-17!5;CL:0000039!6.64e-16!7;CL:0000586!6.64e-16!7 | ||
|ontology_enrichment_celltype_v019=CL:0002322;6.25e-62;5!CL:0000039;1.92e-28;7!CL:0000586;1.92e-28;7!CL:0002321;9.67e-21;15!CL:0000540;8.84e-20;6!CL:0000404;8.84e-20;6!CL:0000148;7.82e-12;10!CL:0000147;1.31e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.18e-62,5;CL:0000039,1.99e-28,7;CL:0000586,1.99e-28,7;CL:0000540,9.12e-20,6;CL:0000031,9.12e-20,6;CL:0000404,9.12e-20,6;CL:0000047,5.50e-15,8;CL:0000148,7.82e-12,10;CL:0000541,7.82e-12,10;CL:0000147,1.31e-08,14;CL:0000133,4.15e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;8.84e-20;6!UBERON:0009117;9.41e-12;10!UBERON:0005564;9.41e-12;10 | |||
|ontology_enrichment_disease=DOID:3095!7.96e-10!22;DOID:2994!7.96e-10!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;5.82e-14;22!DOID:2994;5.82e-14;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,5.98e-14,22;DOID:2994,5.98e-14,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!3.85e-14!8;UBERON:0003135!1.61e-13!11;UBERON:0003101!5.42e-12!22;UBERON:0000079!5.42e-12!22;UBERON:0000991!3.73e-08!21;UBERON:0009196!3.73e-08!21;UBERON:0009117!3.73e-08!21;UBERON:0005564!3.73e-08!21;UBERON:0004176!1.02e-07!22;UBERON:0003886!3.93e-07!63;UBERON:0002553!4.72e-07!70;UBERON:0005156!8.93e-07!59;UBERON:0000990!8.93e-07!59;UBERON:0002323!8.95e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.54e-14;8!UBERON:0003135;9.76e-11;11!UBERON:0000922;1.10e-09;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.54e-14,8;UBERON:0003135,9.76e-11,11 | |||
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| ||
|short_description=p2@DNMT3B | |short_description=p2@DNMT3B | ||
}} | }} |
Latest revision as of 03:38, 25 September 2015
Short description: | p2@DNMT3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DNMT3B_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 83bp_to_AB527132, BC111933, BC118502_5end |
EntrezGene: | DNMT3B |
HGNC: | 2979 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.18e-62 | 5 |
germ line cell | 1.99e-28 | 7 |
germ cell | 1.99e-28 | 7 |
neuron | 9.12e-20 | 6 |
neuroblast | 9.12e-20 | 6 |
electrically signaling cell | 9.12e-20 | 6 |
neuronal stem cell | 5.50e-15 | 8 |
melanocyte | 7.82e-12 | 10 |
melanoblast | 7.82e-12 | 10 |
pigment cell | 1.31e-08 | 14 |
neurectodermal cell | 4.15e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
testis | 1.54e-14 | 8 |
male reproductive organ | 9.76e-11 | 11 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 5.98e-14 | 22 |
germ cell cancer | 5.98e-14 | 22 |