FFCP PHASE1:Hg19::chr5:140743838..140743852,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:140743838..140743852,+
|short_description=p4@PCDHGA5
|description=CAGE_peak_4_at_PCDHGA5_5end
|association_with_transcript=-45bp_to_ENST00000518069,NM_0189...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56110 | |EntrezGene=56110 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8703 | |HGNC=8703 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y5G8 | |UniProt=Q9Y5G8 | ||
|association_with_transcript=-45bp_to_ENST00000518069,NM_018918,NM_032054,uc003lju.1,uc011das.1_5end | |||
|cluster_id=chr5:140743838..140743852,+ | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_4_at_PCDHGA5_5end | |||
|id=chr5:140743838..140743852,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002591;7.62e-26;1!CL:0000047;7.77e-14;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,1.26e-25,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.15e-26;1!UBERON:0010115;7.62e-26;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;2.16e-26;1!DOID:4549;2.16e-26;1!DOID:5861;2.16e-26;1!DOID:6496;2.16e-26;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.16e-26,1;DOID:4549,2.16e-26,1;DOID:5861,2.16e-26,1;DOID:6496,2.16e-26,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.43e-36!115;UBERON:0001017!1.29e-23!82;UBERON:0005743!1.82e-23!86;UBERON:0001049!2.88e-23!57;UBERON:0005068!2.88e-23!57;UBERON:0006241!2.88e-23!57;UBERON:0007135!2.88e-23!57;UBERON:0002780!1.72e-22!41;UBERON:0001890!1.72e-22!41;UBERON:0006240!1.72e-22!41;UBERON:0001893!5.73e-22!34;UBERON:0002616!7.32e-22!59;UBERON:0003080!8.83e-22!42;UBERON:0003075!3.70e-21!86;UBERON:0007284!3.70e-21!86;UBERON:0002346!5.55e-21!90;UBERON:0002791!1.31e-20!33;UBERON:0000073!3.80e-20!94;UBERON:0001016!3.80e-20!94;UBERON:0001869!9.19e-20!32;UBERON:0002020!5.40e-18!34;UBERON:0003528!5.40e-18!34;UBERON:0000955!5.38e-17!69;UBERON:0006238!5.38e-17!69;UBERON:0002619!5.78e-17!22;UBERON:0001950!1.19e-16!20;UBERON:0000956!1.79e-14!25;UBERON:0000203!1.79e-14!25;UBERON:0003056!4.76e-14!61;UBERON:0000924!3.86e-11!173;UBERON:0006601!3.86e-11!173;UBERON:0004121!5.46e-11!169;UBERON:0002420!7.10e-10!9;UBERON:0007245!7.10e-10!9;UBERON:0010009!7.10e-10!9;UBERON:0010011!7.10e-10!9;UBERON:0000454!7.10e-10!9;UBERON:0000153!9.01e-10!129;UBERON:0007811!9.01e-10!129;UBERON:0000033!3.02e-09!123;UBERON:0001871!5.86e-08!7;UBERON:0000025!1.58e-07!194;UBERON:0000475!5.18e-07!365;UBERON:0000468!8.91e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;7.62e-26;1!UBERON:0000996;7.62e-26;1!UBERON:0002360;1.21e-13;2!UBERON:0000078;1.21e-13;2!UBERON:0000094;1.21e-13;2!UBERON:0002012;1.21e-13;2!UBERON:0008886;1.21e-13;2!UBERON:0010743;1.21e-13;2!UBERON:0002331;6.44e-11;10!UBERON:0002418;1.01e-09;3!UBERON:0004755;1.01e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000996,5.93e-26,1;UBERON:0002363,7.62e-26,1;UBERON:0007645,7.62e-26,1;UBERON:0007647,7.62e-26,1;UBERON:0010115,7.62e-26,1;UBERON:0002360,1.21e-13,2;UBERON:0000094,1.21e-13,2;UBERON:0010743,1.21e-13,2;UBERON:0000078,1.55e-13,2;UBERON:0007497,1.55e-13,2;UBERON:0003643,1.55e-13,2;UBERON:0003504,1.55e-13,2;UBERON:0003469,1.55e-13,2;UBERON:0003496,1.55e-13,2;UBERON:0002012,1.55e-13,2;UBERON:0008886,1.55e-13,2;UBERON:0007303,1.55e-13,2;UBERON:0002061,1.55e-13,2;UBERON:0005432,1.55e-13,2;UBERON:0004363,1.55e-13,2;UBERON:0002331,6.94e-11,10;UBERON:0000358,6.94e-11,10;UBERON:0000307,6.94e-11,10;UBERON:0000091,6.94e-11,10;UBERON:0000087,6.94e-11,10;UBERON:0007010,6.94e-11,10;UBERON:0007806,6.94e-11,10;UBERON:0008780,6.94e-11,10;UBERON:0005728,6.94e-11,10;UBERON:0002418,1.01e-09,3;UBERON:0004755,1.01e-09,3;UBERON:0004145,1.81e-09,3 | |||
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| ||
|short_description=p4@PCDHGA5 | |||
}} | }} |
Latest revision as of 04:07, 25 September 2015
Short description: | p4@PCDHGA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PCDHGA5_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -45bp_to_ENST00000518069, NM_018918, NM_032054, uc003lju.1, uc011das.1_5end |
EntrezGene: | PCDHGA5 |
HGNC: | 8703 |
UniProt: | Q9Y5G8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data