FFCP PHASE2:Hg19::chr5:140743838..140743852,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:56110 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:8703 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=56110 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=8703 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9Y5G8 | ||
|association_with_transcript=-45bp_to_ENST00000518069,NM_018918,NM_032054,uc003lju.1,uc011das.1_5end | |association_with_transcript=-45bp_to_ENST00000518069,NM_018918,NM_032054,uc003lju.1,uc011das.1_5end | ||
|cluster_id=chr5:140743838..140743852,+ | |cluster_id=chr5:140743838..140743852,+ |
Latest revision as of 04:08, 25 September 2015
Short description: | p4@PCDHGA5 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PCDHGA5_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -45bp_to_ENST00000518069, NM_018918, NM_032054, uc003lju.1, uc011das.1_5end |
EntrezGene: | PCDHGA5 |
HGNC: | 8703 |
UniProt: | Q9Y5G8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@PCDHGA5 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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smooth muscle cell of the pulmonary artery | 1.26e-25 | 1 |
Showing 1 to 1 of 1 entries
Ontology term | p-value | n |
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vagina | 5.93e-26 | 1 |
dura mater | 7.62e-26 | 1 |
future meninx | 7.62e-26 | 1 |
ectomeninx | 7.62e-26 | 1 |
future dura mater | 7.62e-26 | 1 |
meninx | 1.21e-13 | 2 |
membrane organ | 1.21e-13 | 2 |
meningeal cluster | 1.21e-13 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 1.55e-13 | 2 |
developing epithelial placode | 1.55e-13 | 2 |
Showing 1 to 10 of 32 entries
Ontology term | p-value | n |
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chondrosarcoma | 2.16e-26 | 1 |
extraosseous chondrosarcoma | 2.16e-26 | 1 |
myxoid chondrosarcoma | 2.16e-26 | 1 |
extraskeletal myxoid chondrosarcoma | 2.16e-26 | 1 |
Showing 1 to 4 of 4 entries