FFCP PHASE1:Hg19::chr19:11201287..11201316,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=3949 | |EntrezGene=3949 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=6547 | |HGNC=6547 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=12bp_to_BX648281_5end | |association_with_transcript=12bp_to_BX648281_5end | ||
|cluster_id=chr19:11201287..11201316,+ | |||
|coexpression_cluster_id=C151 | |coexpression_cluster_id=C151 | ||
|description=CAGE_peak_9_at_LDLR_5end | |description=CAGE_peak_9_at_LDLR_5end |
Latest revision as of 04:17, 25 September 2015
Short description: | p9@LDLR |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_LDLR_5end |
Coexpression cluster: | C151_CD14_Natural_Basophils_CD8_Eosinophils_CD4_Mast |
Association with transcript: | 12bp_to_BX648281_5end |
EntrezGene: | LDLR |
HGNC: | 6547 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p9@LDLR |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.21e-46 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.21e-46 | 42 |
myeloid leukocyte | 1.46e-41 | 72 |
leukocyte | 5.33e-41 | 136 |
defensive cell | 2.68e-39 | 48 |
phagocyte | 2.68e-39 | 48 |
granulocyte monocyte progenitor cell | 2.85e-35 | 67 |
hematopoietic lineage restricted progenitor cell | 7.03e-35 | 120 |
hematopoietic stem cell | 3.46e-33 | 168 |
hematopoietic oligopotent progenitor cell | 2.37e-32 | 161 |
Showing 1 to 10 of 41 entries
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.18e-34 | 76 |
bone element | 1.05e-30 | 82 |
hematopoietic system | 6.60e-29 | 98 |
blood island | 6.60e-29 | 98 |
immune system | 1.01e-27 | 93 |
skeletal element | 4.57e-27 | 90 |
hemolymphoid system | 3.24e-25 | 108 |
skeletal system | 2.42e-23 | 100 |
lateral plate mesoderm | 1.31e-10 | 203 |
musculoskeletal system | 4.16e-10 | 167 |
Showing 1 to 10 of 11 entries