FFCP PHASE1:Hg19::chr6:138820604..138820610,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57224 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21021 | |||
|TSSclassifier=strong | |||
|UniProt=E2QRJ1 | |||
|association_with_transcript=20bp_to_ENST00000343505,ENST00000426841_5end | |||
|cluster_id=chr6:138820604..138820610,- | |||
|coexpression_cluster_id=C4564 | |||
|description=CAGE_peak_20_at_NHSL1_5end | |||
|id=chr6:138820604..138820610,- | |||
|ontology_enrichment_celltype=CL:0000181!9.12e-09!12;CL:0000417!9.12e-09!12;CL:0000668!9.12e-09!12;CL:0000414!9.12e-09!12;CL:0000412!9.12e-09!12;CL:0000182!9.12e-09!12;CL:0002605!3.42e-07!3;CL:0000128!4.44e-07!7;CL:0000126!4.44e-07!7;CL:0000127!4.44e-07!7;CL:0002453!4.44e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.42e-20;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.31e-20,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.03e-14;11!UBERON:0009497;1.73e-12;13!UBERON:0003104;3.66e-11;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.61e-13;19!UBERON:0006925;5.61e-13;19!UBERON:0002423;7.74e-10;25!UBERON:0002368;1.41e-09;33!UBERON:0002108;5.49e-09;4!UBERON:0000949;4.21e-08;43!UBERON:0005172;1.09e-07;52!UBERON:0005173;1.09e-07;52!UBERON:0002365;1.22e-07;31!UBERON:0002330;1.22e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.34e-13,19;UBERON:0006925,5.34e-13,19;UBERON:0008836,5.34e-13,19;UBERON:0008835,3.26e-11,22;UBERON:0003894,3.26e-11,22;UBERON:0005172,9.83e-11,54;UBERON:0005173,9.83e-11,54;UBERON:0009854,1.01e-10,23;UBERON:0002368,6.61e-10,35;UBERON:0007499,7.45e-10,25;UBERON:0009497,7.45e-10,25;UBERON:0000015,7.45e-10,25;UBERON:0002423,7.45e-10,25;UBERON:0006235,7.45e-10,25;UBERON:0004161,7.45e-10,25;UBERON:0002417,1.45e-09,60;UBERON:0000916,1.45e-09,60;UBERON:0009856,1.80e-09,26;UBERON:0002108,4.87e-09,4;UBERON:0002365,6.41e-08,31;UBERON:0002330,6.41e-08,31;UBERON:0000949,1.32e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0.410623275218653,0.376627918784408,0.458480434487708,0.656804715599566,0.708397031823113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0,0,0,0,0.768251997860379,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27438136522519,0.831076008928724,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.03092396566842,0.102268682502155,0.492339221844278,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0.649165919226273,0.995261931078505,2.91909962861019,0,1.77912677208373,0.988511511572023,1.8795950910982,0.134802265961354,0,0,0.182454789215666,0,0,0.394584402849391,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.640358984218058,0,0.288180834308212,0,2.4023299700675,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,1.16495949527454,1.73323001075892,1.7307330260045,2.02210631562555,0.295282444544246,0.508039992394707,0,0.136203406111576,0.643012593860077,0,0,0.2249738915515,0,0,0,1.02447419488958,1.15400093896996,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0.732761168390412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14681839138014,0.332787154610557,0,1.10678907948985,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0.172214979660816,0,0,0.139879507719444,0,0,0,0,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,6.38939072215766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0.0714765441766563,2.52821778772363,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0.118920090777569,0.45178432815584,0.879524133963433,0,2.77826969188601,1.5299169235277,0,0,0,0,0,0.4226557275834,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,1.42045243552804,0,0.305966489225945,0,0.18378979906969,0.250707539292375,0.151557396436479,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p20@NHSL1 | |||
}} |
Latest revision as of 05:02, 25 September 2015
Short description: | p20@NHSL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_NHSL1_5end |
Coexpression cluster: | C4564_pineal_small_argyrophil_colon_cord_Hepatocyte_B |
Association with transcript: | 20bp_to_ENST00000343505, ENST00000426841_5end |
EntrezGene: | NHSL1 |
HGNC: | 21021 |
UniProt: | E2QRJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.31e-20 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 5.34e-13 | 19 |
digestive gland | 5.34e-13 | 19 |
liver bud | 5.34e-13 | 19 |
hepatic diverticulum | 3.26e-11 | 22 |
liver primordium | 3.26e-11 | 22 |
abdomen element | 9.83e-11 | 54 |
abdominal segment element | 9.83e-11 | 54 |
digestive tract diverticulum | 1.01e-10 | 23 |
endocrine gland | 6.61e-10 | 35 |
epithelial sac | 7.45e-10 | 25 |
epithelium of foregut-midgut junction | 7.45e-10 | 25 |
anatomical boundary | 7.45e-10 | 25 |
hepatobiliary system | 7.45e-10 | 25 |
foregut-midgut junction | 7.45e-10 | 25 |
septum transversum | 7.45e-10 | 25 |
abdominal segment of trunk | 1.45e-09 | 60 |
abdomen | 1.45e-09 | 60 |
sac | 1.80e-09 | 26 |
small intestine | 4.87e-09 | 4 |
exocrine gland | 6.41e-08 | 31 |
exocrine system | 6.41e-08 | 31 |
endocrine system | 1.32e-07 | 45 |