FFCP PHASE1:Hg19::chr6:138866823..138866851,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=57224 | |EntrezGene=57224 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=21021 | |HGNC=21021 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=E9PAK2 | |UniProt=E9PAK2 | ||
|association_with_transcript=0bp_to_ENST00000342260_5end | |association_with_transcript=0bp_to_ENST00000342260_5end | ||
|cluster_id=chr6:138866823..138866851,- | |||
|coexpression_cluster_id=C4565 | |coexpression_cluster_id=C4565 | ||
|description=CAGE_peak_3_at_NHSL1_5end | |description=CAGE_peak_3_at_NHSL1_5end |
Latest revision as of 05:06, 25 September 2015
Short description: | p3@NHSL1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NHSL1_5end |
Coexpression cluster: | C4565_heart_Meningeal_Endothelial_mesothelioma_Lymphatic_Renal_skeletal |
Association with transcript: | 0bp_to_ENST00000342260_5end |
EntrezGene: | NHSL1 |
HGNC: | 21021 |
UniProt: | E9PAK2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@NHSL1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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mesodermal cell | 7.38e-28 | 121 |
endothelial cell | 2.21e-22 | 36 |
endothelial cell of vascular tree | 3.74e-21 | 24 |
meso-epithelial cell | 5.16e-21 | 45 |
lining cell | 3.60e-19 | 58 |
barrier cell | 3.60e-19 | 58 |
blood vessel endothelial cell | 8.63e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.63e-16 | 18 |
muscle cell | 2.62e-11 | 55 |
embryonic cell | 3.35e-11 | 250 |
Showing 1 to 10 of 21 entries
Ontology term | p-value | n |
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vasculature | 3.86e-35 | 78 |
vascular system | 3.86e-35 | 78 |
circulatory system | 2.07e-34 | 112 |
cardiovascular system | 3.72e-32 | 109 |
vessel | 8.31e-28 | 68 |
splanchnic layer of lateral plate mesoderm | 2.30e-25 | 83 |
epithelial tube | 7.97e-23 | 117 |
epithelial tube open at both ends | 8.89e-23 | 59 |
blood vessel | 8.89e-23 | 59 |
blood vasculature | 8.89e-23 | 59 |
Showing 1 to 10 of 75 entries