FFCP PHASE1:Hg19::chr22:46971635..46971645,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23151 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29113 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-263bp_to_ENST00000447351_5end | |||
|cluster_id=chr22:46971635..46971645,+ | |||
|description=CAGE_peak_8_at_GRAMD4_5end | |||
|id=chr22:46971635..46971645,+ | |||
|ontology_enrichment_celltype=CL:0002541!4.43e-21!3;CL:0002618!1.74e-09!3;CL:0002139!8.76e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.22e-14;3!CL:0002178;1.71e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.22e-14,3;CL:0002178,1.83e-14,3 | |||
|ontology_enrichment_development_v019=UBERON:0005062;3.26e-11;4!UBERON:0007284;3.26e-11;4 | |||
|ontology_enrichment_disease=DOID:114!3.70e-15!2;DOID:178!2.19e-08!1;DOID:326!2.19e-08!1;DOID:3978!2.19e-08!1;DOID:3394!2.19e-08!1;DOID:5844!2.19e-08!1;DOID:1287!5.23e-08!4;DOID:3111!6.19e-08!1;DOID:3603!6.19e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:114;5.22e-79;2!DOID:178;3.30e-40;1!DOID:326;3.30e-40;1!DOID:3978;3.30e-40;1!DOID:3394;3.30e-40;1!DOID:5844;3.30e-40;1!DOID:1287;3.31e-40;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.22e-79,2;DOID:178,3.30e-40,1;DOID:326,3.30e-40,1;DOID:3978,3.30e-40,1;DOID:3394,3.30e-40,1;DOID:5844,3.30e-40,1;DOID:1287,3.31e-40,4 | |||
|ontology_enrichment_uberon=UBERON:0003978!1.48e-21!3;UBERON:0009751!1.48e-21!3;UBERON:0000946!1.48e-21!3;UBERON:0002523!1.48e-21!3;UBERON:0005983!1.48e-21!3;UBERON:0002165!1.48e-21!3;UBERON:0002062!1.48e-21!3;UBERON:0007280!1.48e-21!3;UBERON:0000476!4.43e-21!3;UBERON:0000920!4.43e-21!3;UBERON:0002133!4.26e-15!2;UBERON:0005631!6.17e-12!14;UBERON:0000158!6.17e-12!14;UBERON:0007100!9.46e-12!27;UBERON:0004923!3.98e-10!57;UBERON:0003124!2.45e-09!7;UBERON:0002134!1.91e-08!1;UBERON:0005208!1.91e-08!1;UBERON:0005946!1.91e-08!1;UBERON:0005965!1.91e-08!1;UBERON:0002078!1.91e-08!1;UBERON:0002135!2.35e-08!1;UBERON:0001736!3.11e-08!1;UBERON:0006298!3.11e-08!1;UBERON:0002146!3.34e-08!1;UBERON:0005623!3.34e-08!1;UBERON:0002372!1.21e-07!1;UBERON:0001961!1.21e-07!1;UBERON:0001744!1.21e-07!1;UBERON:0001735!1.21e-07!1;UBERON:0000478!7.22e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;1.81e-40;1!UBERON:0005208;1.81e-40;1!UBERON:0004145;1.81e-40;1!UBERON:0005946;1.81e-40;1!UBERON:0005965;1.81e-40;1!UBERON:0002078;1.81e-40;1!UBERON:0002081;5.15e-21;2!UBERON:0002133;5.15e-21;2!UBERON:0007100;4.96e-15;25!UBERON:0003124;1.22e-14;3!UBERON:0000920;1.22e-14;3!UBERON:0003978;1.71e-14;3!UBERON:0004151;1.71e-14;3!UBERON:0000946;1.71e-14;3!UBERON:0000945;3.10e-09;5!UBERON:0010039;3.10e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,1.48e-40,1;UBERON:0005208,1.48e-40,1;UBERON:0005946,1.48e-40,1;UBERON:0005965,1.48e-40,1;UBERON:0002078,1.48e-40,1;UBERON:0002081,4.66e-21,2;UBERON:0002133,4.66e-21,2;UBERON:0010227,4.66e-21,2;UBERON:0000920,1.22e-14,3;UBERON:0003978,1.60e-14,3;UBERON:0009751,1.60e-14,3;UBERON:0004151,1.60e-14,3;UBERON:0000946,1.60e-14,3;UBERON:0002523,1.60e-14,3;UBERON:0005983,1.60e-14,3;UBERON:0004145,1.60e-14,3;UBERON:0002165,1.60e-14,3;UBERON:0002062,1.60e-14,3;UBERON:0007280,1.60e-14,3;UBERON:0007100,5.42e-14,27;UBERON:0003124,5.08e-07,7;UBERON:0004797,5.70e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.183195186803725,5.86338253620498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0,3.39676336289621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.458320848023367,3.58936512288407,1.59743200399193,4.72148652950228,0.446342914883745,0.268733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@GRAMD4 | |||
}} |
Latest revision as of 05:52, 25 September 2015
Short description: | p8@GRAMD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GRAMD4_5end |
Coexpression cluster: | NA |
Association with transcript: | -263bp_to_ENST00000447351_5end |
EntrezGene: | GRAMD4 |
HGNC: | 29113 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.22e-14 | 3 |
epithelial cell of stomach | 1.83e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 1.48e-40 | 1 |
right atrium valve | 1.48e-40 | 1 |
outflow tract of atrium | 1.48e-40 | 1 |
outflow part of right atrium | 1.48e-40 | 1 |
right cardiac atrium | 1.48e-40 | 1 |
cardiac atrium | 4.66e-21 | 2 |
atrioventricular valve | 4.66e-21 | 2 |
future cardiac atrium | 4.66e-21 | 2 |
egg chorion | 1.22e-14 | 3 |
valve | 1.60e-14 | 3 |
cardiac mesenchyme | 1.60e-14 | 3 |
cardiac chamber | 1.60e-14 | 3 |
cardial valve | 1.60e-14 | 3 |
tunica intima | 1.60e-14 | 3 |
heart layer | 1.60e-14 | 3 |
outflow tract | 1.60e-14 | 3 |
endocardium | 1.60e-14 | 3 |
endocardial cushion | 1.60e-14 | 3 |
presumptive endocardium | 1.60e-14 | 3 |
primary circulatory organ | 5.42e-14 | 27 |
chorion | 5.08e-07 | 7 |
blood vessel layer | 5.70e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.22e-79 | 2 |
vascular disease | 3.30e-40 | 1 |
ischemia | 3.30e-40 | 1 |
extrinsic cardiomyopathy | 3.30e-40 | 1 |
myocardial ischemia | 3.30e-40 | 1 |
myocardial infarction | 3.30e-40 | 1 |
cardiovascular system disease | 3.31e-40 | 4 |