FFCP PHASE1:Hg19::chr11:113185292..113185325,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54970 | |EntrezGene=54970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23700 | |HGNC=23700 | ||
|TSSclassifier=strong | |||
|UniProt=C9JYU1,C9J1D2,E9PP06,E9PKU6,E9PJI9,E9PIS6 | |UniProt=C9JYU1,C9J1D2,E9PP06,E9PKU6,E9PJI9,E9PIS6 | ||
|association_with_transcript=0bp_to_ENST00000314756,ENST00000429951,ENST00000442859,ENST00000464224,ENST00000525965,ENST00000529850,ENST00000531164,uc001pnx.2_5end | |association_with_transcript=0bp_to_ENST00000314756,ENST00000429951,ENST00000442859,ENST00000464224,ENST00000525965,ENST00000529850,ENST00000531164,uc001pnx.2_5end | ||
|cluster_id=chr11:113185292..113185325,+ | |||
|description=CAGE_peak_1_at_TTC12_5end | |description=CAGE_peak_1_at_TTC12_5end | ||
|id=chr11:113185292..113185325,+ | |id=chr11:113185292..113185325,+ | ||
|ontology_enrichment_celltype=CL:0000791;3.75e-08;18!CL:0000789;3.75e-08;18!CL:0002419;3.75e-08;18 | |ontology_enrichment_celltype=CL:0000791!4.45e-08!18;CL:0000789!4.45e-08!18;CL:0002420!4.45e-08!18;CL:0002419!4.45e-08!18;CL:0000790!4.45e-08!18 | ||
| | |ontology_enrichment_celltype_v019=CL:0000791;3.75e-08;18!CL:0000789;3.75e-08;18!CL:0002419;3.75e-08;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.42e-08,18;CL:0000789,4.42e-08,18;CL:0002420,4.42e-08,18;CL:0002419,4.42e-08,18;CL:0000790,4.42e-08,18 | |||
|ontology_enrichment_development_v019=CL:0000790;3.75e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.24e-10!115;UBERON:0004119!1.90e-09!169;UBERON:0000925!1.90e-09!169;UBERON:0006595!1.90e-09!169;UBERON:0001007!6.71e-09!155;UBERON:0001555!6.71e-09!155;UBERON:0007026!6.71e-09!155;UBERON:0000077!7.31e-07!130;UBERON:0001004!8.65e-07!72 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.67e-10,114;UBERON:0004119,1.51e-08,160;UBERON:0000925,1.51e-08,160;UBERON:0006595,1.51e-08,160;UBERON:0001007,4.60e-08,145;UBERON:0001555,4.60e-08,145;UBERON:0007026,4.60e-08,145;UBERON:0001004,6.98e-07,74 | |||
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| ||
|short_description=p1@TTC12 | |short_description=p1@TTC12 | ||
}} | }} |
Latest revision as of 06:06, 25 September 2015
Short description: | p1@TTC12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TTC12_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000314756, ENST00000429951, ENST00000442859, ENST00000464224, ENST00000525965, ENST00000529850, ENST00000531164, uc001pnx.2_5end |
EntrezGene: | TTC12 |
HGNC: | 23700 |
UniProt: | C9JYU1C9J1D2E9PP06E9PKU6E9PJI9E9PIS6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.42e-08 | 18 |
alpha-beta T cell | 4.42e-08 | 18 |
immature T cell | 4.42e-08 | 18 |
mature T cell | 4.42e-08 | 18 |
immature alpha-beta T cell | 4.42e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.67e-10 | 114 |
endoderm-derived structure | 1.51e-08 | 160 |
endoderm | 1.51e-08 | 160 |
presumptive endoderm | 1.51e-08 | 160 |
digestive system | 4.60e-08 | 145 |
digestive tract | 4.60e-08 | 145 |
primitive gut | 4.60e-08 | 145 |
respiratory system | 6.98e-07 | 74 |