FFCP PHASE2:Hg19::chr12:100867653..100867677,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:9971 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:7967 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=9971 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=7967 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q96RI1 | ||
|association_with_transcript=-1bp_to_uc001thp.1,uc001thq.1,uc001thr.1,uc010svj.1,uc010svk.1_5end | |association_with_transcript=-1bp_to_uc001thp.1,uc001thq.1,uc001thr.1,uc010svj.1,uc010svk.1_5end | ||
|cluster_id=chr12:100867653..100867677,+ | |cluster_id=chr12:100867653..100867677,+ |
Latest revision as of 07:22, 25 September 2015
Short description: | p2@NR1H4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NR1H4_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -1bp_to_uc001thp.1, uc001thq.1, uc001thr.1, uc010svj.1, uc010svk.1_5end |
EntrezGene: | NR1H4 |
HGNC: | 7967 |
UniProt: | Q96RI1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@NR1H4 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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hepatocyte | 5.92e-26 | 12 |
hepatic stem cell | 5.21e-11 | 2 |
hepatic mesenchymal stem cell | 5.21e-11 | 2 |
prostate stromal cell | 3.21e-07 | 3 |
cardiac muscle cell | 3.42e-07 | 3 |
cardiac muscle myoblast | 3.42e-07 | 3 |
Showing 1 to 6 of 6 entries
Ontology term | p-value | n |
---|---|---|
liver | 4.36e-42 | 19 |
digestive gland | 4.36e-42 | 19 |
liver bud | 4.36e-42 | 19 |
epithelium of foregut-midgut junction | 2.53e-36 | 25 |
anatomical boundary | 2.53e-36 | 25 |
hepatobiliary system | 2.53e-36 | 25 |
foregut-midgut junction | 2.53e-36 | 25 |
septum transversum | 2.53e-36 | 25 |
hepatic diverticulum | 5.91e-36 | 22 |
liver primordium | 5.91e-36 | 22 |
Showing 1 to 10 of 44 entries