FFCP PHASE1:Hg19::chr17:46800541..46800558,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=360205 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=30143 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_NR_024103,uc002inz.1_5end | |||
|cluster_id=chr17:46800541..46800558,+ | |||
|description=CAGE_peak_1_at_HOXB13-AS1_5end | |||
|id=chr17:46800541..46800558,+ | |||
|ontology_enrichment_celltype=CL:0000148!6.26e-17!10;CL:0000541!6.26e-17!10;CL:0002567!8.13e-12!3;CL:0000147!8.76e-12!14;CL:0000244!8.49e-09!4;CL:0000731!8.49e-09!4;CL:0000710!6.29e-08!20 | |||
|ontology_enrichment_celltype_v019=CL:0002567;5.42e-23;3!CL:0000148;8.62e-19;10!CL:0000147;2.21e-13;14!CL:0002231;1.45e-10;3!CL:0000710;2.61e-09;20!CL:0000244;2.31e-08;4!CL:0000731;2.31e-08;4!CL:0000075;7.76e-07;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,7.06e-23,3;CL:0000148,9.29e-19,10;CL:0000541,9.29e-19,10;CL:0000147,2.33e-13,14;CL:0002231,1.53e-10,3;CL:0000710,2.71e-09,20;CL:0000244,2.23e-08,4;CL:0000731,2.23e-08,4;CL:0000333,1.10e-07,41;CL:0000075,7.96e-07,27 | |||
|ontology_enrichment_development_v019=UBERON:0009847;6.13e-11;3!UBERON:0003353;6.13e-11;3 | |||
|ontology_enrichment_disease=DOID:3095!1.59e-14!22;DOID:2994!1.59e-14!22;DOID:171!5.29e-13!10 | |||
|ontology_enrichment_disease_v019=DOID:171;1.29e-26;10!DOID:3095;7.24e-16;22!DOID:2994;7.24e-16;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.41e-26,10;DOID:3095,7.59e-16,22;DOID:2994,7.59e-16,22 | |||
|ontology_enrichment_uberon=UBERON:0003101!2.51e-11!22;UBERON:0000079!2.51e-11!22;UBERON:0000162!1.41e-08!14;UBERON:0001353!1.41e-08!14;UBERON:0000163!1.41e-08!14;UBERON:0006866!1.41e-08!14;UBERON:0000164!1.41e-08!14;UBERON:0000931!1.41e-08!14;UBERON:0002367!5.62e-08!11;UBERON:0010147!5.62e-08!11;UBERON:0009846!5.62e-08!11;UBERON:0003353!5.62e-08!11;UBERON:0004902!5.62e-08!11;UBERON:0003820!5.62e-08!11;UBERON:0009847!5.62e-08!11;UBERON:0004122!5.87e-08!15;UBERON:0003937!2.79e-07!12;UBERON:0005399!2.79e-07!12;UBERON:0000365!4.15e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;4.94e-31;4!UBERON:0000923;4.94e-31;4!UBERON:0010316;4.94e-31;4!UBERON:0005291;4.94e-31;4!UBERON:0002050;6.93e-25;5!UBERON:0005423;6.93e-25;5!UBERON:0002367;6.95e-11;11!UBERON:0010147;6.95e-11;11!UBERON:0003937;5.44e-10;12!UBERON:0005399;5.44e-10;12!UBERON:0003101;3.71e-08;22!UBERON:0000079;3.71e-08;22!UBERON:0000365;7.48e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002367,6.18e-11,11;UBERON:0010147,6.18e-11,11;UBERON:0009846,6.18e-11,11;UBERON:0003353,6.18e-11,11;UBERON:0004902,6.18e-11,11;UBERON:0003820,6.18e-11,11;UBERON:0009847,6.18e-11,11;UBERON:0003937,4.89e-10,12;UBERON:0005399,4.89e-10,12;UBERON:0000162,1.27e-08,14;UBERON:0001353,1.27e-08,14;UBERON:0000163,1.27e-08,14;UBERON:0006866,1.27e-08,14;UBERON:0000164,1.27e-08,14;UBERON:0000931,1.27e-08,14;UBERON:0003101,3.46e-08,22;UBERON:0000079,3.46e-08,22;UBERON:0004122,4.68e-08,15;UBERON:0000365,7.26e-07,5;UBERON:0006554,7.34e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.825472625798197,4.96584953225761,1.17217447210047,5.13217338068116,0.102827492703324,7.20823338825402,5.71652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20303882181971,1.28913384510255,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58303223602738,0,2.66058092122005,0.918893600827838,0,0,0,0,0,0,0,0,1.06824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,3.87998954356427,0,0,0,0,0,0,0,0.307240764308458,0.671028323677248,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0,0,2.04628948090749,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,5.54048765428183,0.173624994933292,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640150378164845,0,0,0,0,0,0,0,1.88719130227076,0,19.5192409447129,5.52694792264376,6.32072397720911,1.11728983594649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,4.92439484206938,0,0,0,0,0,0,0,0,0,0,0,6.34018990784794,1.96232732126285,0,0,0,0,0,0,0,1.3948971044175,4.69417335216964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,10.3454403083911,0.713520544665411,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886889507080059,1.22386595690378,0.534434810531121,0.36757959813938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813792356631477,0,0,0 | |||
|short_description=p1@HOXB13-AS1 | |||
}} |
Latest revision as of 07:40, 25 September 2015
Short description: | p1@HOXB13-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HOXB13-AS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NR_024103, uc002inz.1_5end |
EntrezGene: | HOXB13-AS1 |
HGNC: | 30143 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 7.06e-23 | 3 |
melanocyte | 9.29e-19 | 10 |
melanoblast | 9.29e-19 | 10 |
pigment cell | 2.33e-13 | 14 |
epithelial cell of prostate | 1.53e-10 | 3 |
neurecto-epithelial cell | 2.71e-09 | 20 |
transitional epithelial cell | 2.23e-08 | 4 |
urothelial cell | 2.23e-08 | 4 |
migratory neural crest cell | 1.10e-07 | 41 |
columnar/cuboidal epithelial cell | 7.96e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
prostate gland | 6.18e-11 | 11 |
male accessory sex gland | 6.18e-11 | 11 |
embryonic cloacal epithelium | 6.18e-11 | 11 |
epithelium of hindgut | 6.18e-11 | 11 |
urogenital sinus epithelium | 6.18e-11 | 11 |
prostate bud | 6.18e-11 | 11 |
prostate field | 6.18e-11 | 11 |
sex gland | 4.89e-10 | 12 |
male reproductive gland | 4.89e-10 | 12 |
cloaca | 1.27e-08 | 14 |
anal region | 1.27e-08 | 14 |
embryonic cloaca | 1.27e-08 | 14 |
terminal part of digestive tract | 1.27e-08 | 14 |
primitive urogenital sinus | 1.27e-08 | 14 |
proctodeum | 1.27e-08 | 14 |
male organism | 3.46e-08 | 22 |
male reproductive system | 3.46e-08 | 22 |
genitourinary system | 4.68e-08 | 15 |
urothelium | 7.26e-07 | 5 |
urinary system structure | 7.34e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.41e-26 | 10 |
germ cell and embryonal cancer | 7.59e-16 | 22 |
germ cell cancer | 7.59e-16 | 22 |