FFCP PHASE1:Mm9::chr16:5204074..5204110,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=27426 | |EntrezGene=27426 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=38 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BJ48,D3Z6C9 | |UniProt=Q8BJ48,D3Z6C9 | ||
|association_with_transcript=0bp_to_ENSMUST00000023911,ENSMUST00000147567,NM_013796,NR_027804,uc007ybv.2,uc007ybw.2_5end | |association_with_transcript=0bp_to_ENSMUST00000023911,ENSMUST00000147567,NM_013796,NR_027804,uc007ybv.2,uc007ybw.2_5end | ||
|cluster_id=chr16:5204074..5204110,- | |||
|description=CAGE_peak_1_at_Nagpa_5end | |description=CAGE_peak_1_at_Nagpa_5end | ||
|id=chr16:5204074..5204110,- | |id=chr16:5204074..5204110,- | ||
|ontology_enrichment_celltype=CL:0000219!4.50e-14!54;CL:0002320!1.33e-11!46;CL:0000134!1.33e-11!46;CL:0000063!3.79e-08!66;CL:0000988!6.89e-07!32;CL:0002032!6.89e-07!32;CL:0000037!6.89e-07!32;CL:0000566!6.89e-07!32;CL:0000837!6.89e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,4.46e-14,54;CL:0002320,1.32e-11,46;CL:0000134,1.32e-11,46;CL:0000988,6.83e-07,32;CL:0002032,6.83e-07,32;CL:0000037,6.83e-07,32;CL:0000837,6.83e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.33e-11!46;UBERON:0002405!4.46e-10!70;UBERON:0007023!8.40e-10!51;UBERON:0002371!3.49e-08!16;UBERON:0000926!4.46e-08!193;UBERON:0004120!4.46e-08!193;UBERON:0006603!4.46e-08!193;UBERON:0005256!1.02e-07!47;UBERON:0002193!1.23e-07!48;UBERON:0002204!1.50e-07!32;UBERON:0004119!2.83e-07!130;UBERON:0000925!2.83e-07!130;UBERON:0006595!2.83e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.32e-11,46;UBERON:0007023,8.40e-10,51;UBERON:0005256,6.01e-09,45;UBERON:0004119,2.00e-08,118;UBERON:0000925,2.00e-08,118;UBERON:0006595,2.00e-08,118;UBERON:0002371,3.49e-08,16;UBERON:0001007,8.11e-08,116;UBERON:0001555,8.11e-08,116;UBERON:0007026,8.11e-08,116;UBERON:0002193,1.22e-07,48;UBERON:0002405,1.22e-07,48;UBERON:0002204,1.50e-07,32;UBERON:0004921,2.44e-07,114;UBERON:0000926,3.64e-07,120;UBERON:0004120,3.64e-07,120;UBERON:0006603,3.64e-07,120 | |||
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| ||
|short_description=p1@Nagpa | |short_description=p1@Nagpa | ||
}} | }} |
Latest revision as of 15:43, 25 September 2015
Short description: | p1@Nagpa |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nagpa_5end |
Coexpression cluster: | MCL_coexpression_mm9:38 |
Association with transcript: | 0bp_to_ENSMUST00000023911, ENSMUST00000147567, NM_013796, NR_027804, uc007ybv.2, uc007ybw.2_5end |
EntrezGene: | Nagpa |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 4.46e-14 | 54 |
connective tissue cell | 1.32e-11 | 46 |
mesenchymal cell | 1.32e-11 | 46 |
hematopoietic cell | 6.83e-07 | 32 |
hematopoietic oligopotent progenitor cell | 6.83e-07 | 32 |
hematopoietic stem cell | 6.83e-07 | 32 |
hematopoietic multipotent progenitor cell | 6.83e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.32e-11 | 46 |
adult organism | 8.40e-10 | 51 |
trunk mesenchyme | 6.01e-09 | 45 |
endoderm-derived structure | 2.00e-08 | 118 |
endoderm | 2.00e-08 | 118 |
presumptive endoderm | 2.00e-08 | 118 |
bone marrow | 3.49e-08 | 16 |
digestive system | 8.11e-08 | 116 |
digestive tract | 8.11e-08 | 116 |
primitive gut | 8.11e-08 | 116 |
hemolymphoid system | 1.22e-07 | 48 |
immune system | 1.22e-07 | 48 |
musculoskeletal system | 1.50e-07 | 32 |
subdivision of digestive tract | 2.44e-07 | 114 |
mesoderm | 3.64e-07 | 120 |
mesoderm-derived structure | 3.64e-07 | 120 |
presumptive mesoderm | 3.64e-07 | 120 |