FFCP PHASE1:Mm9::chr7:116759864..116759888,-: Difference between revisions
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{{FFCP|EntrezGene=76954|HGNC=|UniProt=Q924W7,Q3TYX0|association_with_transcript=193bp_to_ENSMUST00000077909,ENSMUST00000084738,NR_037617,uc009jdt.1,uc009jdw.1_5end|description=CAGE_peak_4_at_St5_5end|id=chr7:116759864..116759888,-|ontology_enrichment_celltype=CL:0002453!8.65e-07!8|ontology_enrichment_celltype_v019_2=CL:0002453,6.48e-19,8;CL:0000333,7.71e-15,10;CL:0000095,7.71e-15,10;CL:0000243,7.71e-15,10;CL:0000123,7.71e-15,10;CL:0000125,7.71e-15,10;CL:0000030,7.71e-15,10;CL:0000339,7.71e-15,10;CL:0000128,1.19e-14,6;CL:0000126,1.19e-14,6;CL:0000127,1.19e-14,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003076!8.47e-08!12;UBERON:0003057!8.47e-08!12;UBERON:0001045!9.61e-08!13;UBERON:0001264!3.81e-07!12;UBERON:0003922!3.81e-07!12;UBERON:0002114!3.81e-07!12;UBERON:0003923!3.81e-07!12;UBERON:0003924!3.81e-07!12;UBERON:0003921!3.81e-07!12;UBERON:0001017!4.06e-07!73;UBERON:0005743!4.06e-07!73|ontology_enrichment_uberon_v019_2=UBERON:0001264,4.09e-16,12;UBERON:0002037,1.41e-10,4;UBERON:0002680,1.41e-10,4;UBERON:0001895,1.41e-10,4;UBERON:0010092,1.41e-10,4;UBERON:0006215,1.41e-10,4;UBERON:0004733,4.04e-10,6;UBERON:0004732,4.04e-10,6;UBERON:0002028,4.04e-10,6;UBERON:0007277,4.04e-10,6;UBERON:0002075,1.70e-09,19;UBERON:0003076,6.76e-09,12;UBERON:0003057,6.76e-09,12|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,1.00727563147134,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.47997726838022,0,0.57423196411502,0.430761996159075,1.07735616342945,0,0,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,2.34717403304412,2.8343270329458,9.44650585758229,12.8323733389027,1.39986421625363,10.062679505548,0,0,0,0.257259436035947,0,1.03134418455488,0.202316460859598,0,0.633831403506179,2.03306719241479,0.889294796111139,0,0,0,2.39680088414724,4.61061966385865,0,0,0.420649922702764,1.14260393761521,0.883474163806454,0.122490799214954,0,0,0,0.255374676170375,0.46081959976873,0.395658863190582,0.640413505216868,1.56274011167028,1.3959149950069,0,0.45839474333043,0.883885756421003,2.13557521198654,0.931997229126503,0,0.0755715601067855,0.579728977403356,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.29688427812965,0,0.304465478312141,0,0.301445281105245,0,0.251333182659351,0,0.722996784599558,0,0.323533699894818,0.220841518460394,0,1.86391761218122,13.7606974595427,16.3368431314495,1.53274233125155,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0.62336413367868,0.648965052271031,0.203678727700633,0.124406970610093,0,0.420883711772948,3.513251959993,0.689706313300419,0.540186389416048,1.05493372485001,0.340182495756639,0.2562274405697,0.281105173679186,0.517406741478031,0,0,0.175951124163949,0,0,0.348252166522167,0.411564272815887,0,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0,0.196764231747404,0,0,0,0.467061369468678,0.658239399653922,0.164167464079095,0.405344047729279,0,1.09775057645525,0.939444931322602,0.420579897128254,1.23485534855141,0.660837565967596,0,0,0.232236671860439,0.257734922644187,0.605050573870028,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0.994782360205754,0.19496408711912,0,0.216138049874694,0.597423819763102,0.189667900953082,0,0,0,0,0.0701358198903186,0.252946148497029,0.590440591918409,0,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,1.17254380209271,1.19021820443007,0.585400943573396,0.472905432318573,0.8858587585951,0.478364305972461,0.491589944147214,0.690739927463582,0.289298117163023,0,0,0,0,0.80275294993896,1.05490517932983,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0.477937595905104,0.222798674082394,0.849229592366497,0,0.292255857911312,0.790575555893047,0.321321316421807,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,19.9117707509944,0,0.604647113929502,4.33791683438566,4.42952839321159,2.76691633149535,0.775284879504663,4.72593848320757,6.06045543254026,10.7452497698177,6.32511651449993,18.5643977846736,0.680879211507576,0.900305470156551,0.388076051348264,0.214337035031592,0.709360934569094,0.713475270408282,0.329098041204242,0,0,0,0,0.16488625294148,0,0,0,0,0.582961673259701,0.556275906031529,0,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0,0,0,0.954670618015114,0.632671987162271,0.406638934253697,0.108005340821801,0.209088296014469,0.218362563746178,0.269728692769641,0.578574190077352,1.04702376793612,0,4.97071450469541,0,0.149516546043979,0.330916980914195,0.194451188344048,0,0.506868376472335,0,0.13020438484395,0.209718688851422,0.241584120826006,0,0.316011120628178,0.202725215290164,0.308132871494482,0.129920822977795,0,0,0.120195449519969,0.295379054349154,0,0,0.201652370273681,0,0.0962118416403295,0.116876902181569,0.453460767230423,0,0,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0.501572104035363,0,0.460325236507177,0,0,0,0,0,0,0.453142408984205,0,0.31136204275253,0.399024873401031,0.341467211508268,0.243106717068294,0,0,1.11123363900808,0,0.962757628775446,0.252697211763798,0,0.377252682772152,0.280924522409647,0.192075457214608,0.229741875822453,0.952587382566147,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0.177475806159338,0.238436189947321,0.145346416632329,0.282328141245992,0.0846146078916765,0.182927972872773,0.263069711437843,0.679020569229309,0.561142271657738,0.593175090620871,0.0985044823755635,0.409231043169689,0,0.385813221962283,0.999242311751784,0.233931608445408,0,0,0.220591419119515,0.231867835620421|short_description=p4@St5}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=76954 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q924W7,Q3TYX0 | |||
|association_with_transcript=193bp_to_ENSMUST00000077909,ENSMUST00000084738,NR_037617,uc009jdt.1,uc009jdw.1_5end | |||
|cluster_id=chr7:116759864..116759888,- | |||
|description=CAGE_peak_4_at_St5_5end | |||
|id=chr7:116759864..116759888,- | |||
|ontology_enrichment_celltype=CL:0002453!8.65e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,6.48e-19,8;CL:0000333,7.71e-15,10;CL:0000095,7.71e-15,10;CL:0000243,7.71e-15,10;CL:0000123,7.71e-15,10;CL:0000125,7.71e-15,10;CL:0000030,7.71e-15,10;CL:0000339,7.71e-15,10;CL:0000128,1.19e-14,6;CL:0000126,1.19e-14,6;CL:0000127,1.19e-14,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!8.47e-08!12;UBERON:0003057!8.47e-08!12;UBERON:0001045!9.61e-08!13;UBERON:0001264!3.81e-07!12;UBERON:0003922!3.81e-07!12;UBERON:0002114!3.81e-07!12;UBERON:0003923!3.81e-07!12;UBERON:0003924!3.81e-07!12;UBERON:0003921!3.81e-07!12;UBERON:0001017!4.06e-07!73;UBERON:0005743!4.06e-07!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,4.09e-16,12;UBERON:0002037,1.41e-10,4;UBERON:0002680,1.41e-10,4;UBERON:0001895,1.41e-10,4;UBERON:0010092,1.41e-10,4;UBERON:0006215,1.41e-10,4;UBERON:0004733,4.04e-10,6;UBERON:0004732,4.04e-10,6;UBERON:0002028,4.04e-10,6;UBERON:0007277,4.04e-10,6;UBERON:0002075,1.70e-09,19;UBERON:0003076,6.76e-09,12;UBERON:0003057,6.76e-09,12 | |||
|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,1.00727563147134,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.47997726838022,0,0.57423196411502,0.430761996159075,1.07735616342945,0,0,0.221730510655305,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,2.34717403304412,2.8343270329458,9.44650585758229,12.8323733389027,1.39986421625363,10.062679505548,0,0,0,0.257259436035947,0,1.03134418455488,0.202316460859598,0,0.633831403506179,2.03306719241479,0.889294796111139,0,0,0,2.39680088414724,4.61061966385865,0,0,0.420649922702764,1.14260393761521,0.883474163806454,0.122490799214954,0,0,0,0.255374676170375,0.46081959976873,0.395658863190582,0.640413505216868,1.56274011167028,1.3959149950069,0,0.45839474333043,0.883885756421003,2.13557521198654,0.931997229126503,0,0.0755715601067855,0.579728977403356,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.29688427812965,0,0.304465478312141,0,0.301445281105245,0,0.251333182659351,0,0.722996784599558,0,0.323533699894818,0.220841518460394,0,1.86391761218122,13.7606974595427,16.3368431314495,1.53274233125155,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0.62336413367868,0.648965052271031,0.203678727700633,0.124406970610093,0,0.420883711772948,3.513251959993,0.689706313300419,0.540186389416048,1.05493372485001,0.340182495756639,0.2562274405697,0.281105173679186,0.517406741478031,0,0,0.175951124163949,0,0,0.348252166522167,0.411564272815887,0,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0,0.196764231747404,0,0,0,0.467061369468678,0.658239399653922,0.164167464079095,0.405344047729279,0,1.09775057645525,0.939444931322602,0.420579897128254,1.23485534855141,0.660837565967596,0,0,0.232236671860439,0.257734922644187,0.605050573870028,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0.994782360205754,0.19496408711912,0,0.216138049874694,0.597423819763102,0.189667900953082,0,0,0,0,0.0701358198903186,0.252946148497029,0.590440591918409,0,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,1.17254380209271,1.19021820443007,0.585400943573396,0.472905432318573,0.8858587585951,0.478364305972461,0.491589944147214,0.690739927463582,0.289298117163023,0,0,0,0,0.80275294993896,1.05490517932983,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0.477937595905104,0.222798674082394,0.849229592366497,0,0.292255857911312,0.790575555893047,0.321321316421807,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,19.9117707509944,0,0.604647113929502,4.33791683438566,4.42952839321159,2.76691633149535,0.775284879504663,4.72593848320757,6.06045543254026,10.7452497698177,6.32511651449993,18.5643977846736,0.680879211507576,0.900305470156551,0.388076051348264,0.214337035031592,0.709360934569094,0.713475270408282,0.329098041204242,0,0,0,0,0.16488625294148,0,0,0,0,0.582961673259701,0.556275906031529,0,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0,0,0,0.954670618015114,0.632671987162271,0.406638934253697,0.108005340821801,0.209088296014469,0.218362563746178,0.269728692769641,0.578574190077352,1.04702376793612,0,4.97071450469541,0,0.149516546043979,0.330916980914195,0.194451188344048,0,0.506868376472335,0,0.13020438484395,0.209718688851422,0.241584120826006,0,0.316011120628178,0.202725215290164,0.308132871494482,0.129920822977795,0,0,0.120195449519969,0.295379054349154,0,0,0.201652370273681,0,0.0962118416403295,0.116876902181569,0.453460767230423,0,0,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0.501572104035363,0,0.460325236507177,0,0,0,0,0,0,0.453142408984205,0,0.31136204275253,0.399024873401031,0.341467211508268,0.243106717068294,0,0,1.11123363900808,0,0.962757628775446,0.252697211763798,0,0.377252682772152,0.280924522409647,0.192075457214608,0.229741875822453,0.952587382566147,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0.177475806159338,0.238436189947321,0.145346416632329,0.282328141245992,0.0846146078916765,0.182927972872773,0.263069711437843,0.679020569229309,0.561142271657738,0.593175090620871,0.0985044823755635,0.409231043169689,0,0.385813221962283,0.999242311751784,0.233931608445408,0,0,0.220591419119515,0.231867835620421 | |||
|short_description=p4@St5 | |||
}} |
Latest revision as of 17:13, 25 September 2015
Short description: | p4@St5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_St5_5end |
Coexpression cluster: | NA |
Association with transcript: | 193bp_to_ENSMUST00000077909, ENSMUST00000084738, NR_037617, uc009jdt.1, uc009jdw.1_5end |
EntrezGene: | St5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 6.48e-19 | 8 |
migratory neural crest cell | 7.71e-15 | 10 |
neuron associated cell | 7.71e-15 | 10 |
glial cell (sensu Vertebrata) | 7.71e-15 | 10 |
neuron associated cell (sensu Vertebrata) | 7.71e-15 | 10 |
glial cell | 7.71e-15 | 10 |
glioblast | 7.71e-15 | 10 |
glioblast (sensu Vertebrata) | 7.71e-15 | 10 |
oligodendrocyte | 1.19e-14 | 6 |
macroglial cell | 1.19e-14 | 6 |
astrocyte | 1.19e-14 | 6 |
Ontology term | p-value | n |
---|---|---|
pancreas | 4.09e-16 | 12 |
cerebellum | 1.41e-10 | 4 |
regional part of metencephalon | 1.41e-10 | 4 |
metencephalon | 1.41e-10 | 4 |
future metencephalon | 1.41e-10 | 4 |
rhombic lip | 1.41e-10 | 4 |
segmental subdivision of hindbrain | 4.04e-10 | 6 |
segmental subdivision of nervous system | 4.04e-10 | 6 |
hindbrain | 4.04e-10 | 6 |
presumptive hindbrain | 4.04e-10 | 6 |
viscus | 1.70e-09 | 19 |
posterior neural tube | 6.76e-09 | 12 |
chordal neural plate | 6.76e-09 | 12 |