FFCP PHASE1:Mm9::chr7:125743708..125743718,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr7:125743708..125743718,+ to FFCP PHASE1:Mm9::chr7:125743708..125743718,+: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=74424 | |EntrezGene=74424 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q32NZ6 | |UniProt=Q32NZ6 | ||
|association_with_transcript=24bp_to_ENSMUST00000121744_5end | |||
|cluster_id=chr7:125743708..125743718,+ | |||
|description=CAGE_peak_4_at_Tmc5_5end | |||
|id=chr7:125743708..125743718,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.01e-10!9;CL:0002251!1.01e-10!9;CL:0000239!4.13e-08!6;CL:0000677!4.13e-08!6;CL:0000212!4.13e-08!6;CL:0000584!4.13e-08!6;CL:0002076!5.35e-08!15;CL:0000066!1.78e-07!25;CL:0000075!9.64e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.94e-20,9;CL:0002251,4.94e-20,9;CL:0000239,9.05e-15,6;CL:0000677,9.05e-15,6;CL:0000584,9.05e-15,6;CL:0000075,1.50e-12,7;CL:0002076,2.48e-11,15;CL:0000066,3.86e-11,25;CL:0000223,4.45e-08,20;CL:0000682,1.54e-07,3;CL:0002250,7.12e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.94e-26!43;UBERON:0005409!4.06e-25!59;UBERON:0000344!4.17e-17!15;UBERON:0001242!3.22e-15!13;UBERON:0000060!3.22e-15!13;UBERON:0001262!3.22e-15!13;UBERON:0004786!3.22e-15!13;UBERON:0003350!1.01e-10!9;UBERON:0004808!1.01e-10!9;UBERON:0001277!1.01e-10!9;UBERON:0004923!5.75e-10!24;UBERON:0004119!3.56e-09!130;UBERON:0000925!3.56e-09!130;UBERON:0006595!3.56e-09!130;UBERON:0001007!6.32e-09!128;UBERON:0001555!6.32e-09!128;UBERON:0007026!6.32e-09!128;UBERON:0000485!2.79e-08!11;UBERON:0004921!6.39e-08!126;UBERON:0004185!6.39e-08!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.51e-56,31;UBERON:0005409,2.85e-43,47;UBERON:0000344,5.83e-33,15;UBERON:0001242,3.92e-29,13;UBERON:0001262,3.92e-29,13;UBERON:0004786,3.92e-29,13;UBERON:0003350,4.94e-20,9;UBERON:0004808,4.94e-20,9;UBERON:0001277,4.94e-20,9;UBERON:0004923,2.98e-19,24;UBERON:0000485,4.47e-16,11;UBERON:0001007,9.25e-16,116;UBERON:0001555,9.25e-16,116;UBERON:0007026,9.25e-16,116;UBERON:0004119,2.27e-15,118;UBERON:0000925,2.27e-15,118;UBERON:0006595,2.27e-15,118;UBERON:0004921,9.45e-14,114;UBERON:0002108,4.00e-10,4;UBERON:0000331,4.50e-08,3;UBERON:0002116,4.50e-08,3;UBERON:0001204,4.50e-08,3;UBERON:0001168,4.50e-08,3 | |||
|phase1_expression=0,9.07336059862339,6.3699893514535,12.40103266358,11.520601788766,4.53274034162102,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,2.87986361028132,4.12936705920906,6.31655160526522,3.01533397311352,5.17130958446134,9.69119439227507,7.30887376303799,2.88249663851896,0,0,0,4.04392267651784,1.99481574430191,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0.760079596425296,0.505524445014783,1.82694207550496,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,1.86391761218122,0,0,6.89734049063197,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.497627882440372,2.77995034277042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.8076396769307,6.87571473325215,0,0,0.77320476793256,4.03367049246685,5.55945109612176,4.56541502670142,9.49058123089023,7.41145296258049,6.28338022000674,5.17286827306992,6.04388670069272,7.19055526923377,8.21324589523838,7.36822711041159,0,0,0,0,0,0.280543279561274,0.442655759869801,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0.307435147943927,0.775284879504663,0,0.356497378384721,0,2.10837217149998,0,0,0,0,0,0.177340233642274,0,0,0,0,0.42366414172764,0,0,0,0,0,0.164140899745061,5.82961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0.86404272657441,0.209088296014469,1.52853794622324,0.809186078308924,0.743881101528023,1.57053565190418,6.48074866458964,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.655490552289177,0.256100609619477,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0,0.342869252385415,0.70990322463735,0.476872379894642,0.290692833264657,0.376437521661322,0.169229215783353,0.182927972872773,0.263069711437843,0.679020569229309,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0,0.467863216890817,0,0,0,0 | |phase1_expression=0,9.07336059862339,6.3699893514535,12.40103266358,11.520601788766,4.53274034162102,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,2.87986361028132,4.12936705920906,6.31655160526522,3.01533397311352,5.17130958446134,9.69119439227507,7.30887376303799,2.88249663851896,0,0,0,4.04392267651784,1.99481574430191,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0.760079596425296,0.505524445014783,1.82694207550496,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,1.86391761218122,0,0,6.89734049063197,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.497627882440372,2.77995034277042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.8076396769307,6.87571473325215,0,0,0.77320476793256,4.03367049246685,5.55945109612176,4.56541502670142,9.49058123089023,7.41145296258049,6.28338022000674,5.17286827306992,6.04388670069272,7.19055526923377,8.21324589523838,7.36822711041159,0,0,0,0,0,0.280543279561274,0.442655759869801,0.295220295959204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0.188605079755898,0,0.307435147943927,0.775284879504663,0,0.356497378384721,0,2.10837217149998,0,0,0,0,0,0.177340233642274,0,0,0,0,0.42366414172764,0,0,0,0,0,0.164140899745061,5.82961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0.86404272657441,0.209088296014469,1.52853794622324,0.809186078308924,0.743881101528023,1.57053565190418,6.48074866458964,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.655490552289177,0.256100609619477,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0,0.342869252385415,0.70990322463735,0.476872379894642,0.290692833264657,0.376437521661322,0.169229215783353,0.182927972872773,0.263069711437843,0.679020569229309,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0,0.467863216890817,0,0,0,0 | ||
|short_description=p4@Tmc5 | |||
}} | }} |
Latest revision as of 19:02, 25 September 2015
Short description: | p4@Tmc5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Tmc5_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 24bp_to_ENSMUST00000121744_5end |
EntrezGene: | Tmc5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.94e-20 | 9 |
epithelial cell of alimentary canal | 4.94e-20 | 9 |
brush border epithelial cell | 9.05e-15 | 6 |
gut absorptive cell | 9.05e-15 | 6 |
enterocyte | 9.05e-15 | 6 |
columnar/cuboidal epithelial cell | 1.50e-12 | 7 |
endo-epithelial cell | 2.48e-11 | 15 |
epithelial cell | 3.86e-11 | 25 |
endodermal cell | 4.45e-08 | 20 |
M cell of gut | 1.54e-07 | 3 |
intestinal crypt stem cell | 7.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.51e-56 | 31 |
gastrointestinal system | 2.85e-43 | 47 |
mucosa | 5.83e-33 | 15 |
intestinal mucosa | 3.92e-29 | 13 |
wall of intestine | 3.92e-29 | 13 |
gastrointestinal system mucosa | 3.92e-29 | 13 |
epithelium of mucosa | 4.94e-20 | 9 |
gastrointestinal system epithelium | 4.94e-20 | 9 |
intestinal epithelium | 4.94e-20 | 9 |
organ component layer | 2.98e-19 | 24 |
simple columnar epithelium | 4.47e-16 | 11 |
digestive system | 9.25e-16 | 116 |
digestive tract | 9.25e-16 | 116 |
primitive gut | 9.25e-16 | 116 |
endoderm-derived structure | 2.27e-15 | 118 |
endoderm | 2.27e-15 | 118 |
presumptive endoderm | 2.27e-15 | 118 |
subdivision of digestive tract | 9.45e-14 | 114 |
small intestine | 4.00e-10 | 4 |
ileal mucosa | 4.50e-08 | 3 |
ileum | 4.50e-08 | 3 |
mucosa of small intestine | 4.50e-08 | 3 |
wall of small intestine | 4.50e-08 | 3 |