FFCP PHASE1:Mm9::chr2:13715444..13715506,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:13715444..13715506,-
|short_description=p1@St8sia6
|description=CAGE_peak_1_at_St8sia6_5end
|association_with_transcript=-9bp_to_ENSMUST00000003509,ENSMUST...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=241230 | |EntrezGene=241230 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3317 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K4T1,Q8BI43 | |UniProt=Q8K4T1,Q8BI43 | ||
|association_with_transcript=-9bp_to_ENSMUST00000003509,ENSMUST00000170090_5end | |||
|cluster_id=chr2:13715444..13715506,- | |||
|description=CAGE_peak_1_at_St8sia6_5end | |||
|id=chr2:13715444..13715506,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.57e-07,9;CL:0000789,7.57e-07,9;CL:0002420,7.57e-07,9;CL:0002419,7.57e-07,9;CL:0000790,7.57e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!1.89e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,9.55e-10,21;UBERON:0006554,9.47e-08,18;UBERON:0002113,1.19e-07,14;UBERON:0003918,1.19e-07,14;UBERON:0011143,1.19e-07,14;UBERON:0005095,1.19e-07,14;UBERON:0007687,1.19e-07,14;UBERON:0001008,4.20e-07,19 | |||
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| ||
|short_description=p1@St8sia6 | |||
}} | }} |
Latest revision as of 19:42, 25 September 2015
Short description: | p1@St8sia6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_St8sia6_5end |
Coexpression cluster: | MCL_coexpression_mm9:3317 |
Association with transcript: | -9bp_to_ENSMUST00000003509, ENSMUST00000170090_5end |
EntrezGene: | St8sia6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.57e-07 | 9 |
alpha-beta T cell | 7.57e-07 | 9 |
immature T cell | 7.57e-07 | 9 |
mature T cell | 7.57e-07 | 9 |
immature alpha-beta T cell | 7.57e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 9.55e-10 | 21 |
urinary system structure | 9.47e-08 | 18 |
kidney | 1.19e-07 | 14 |
kidney mesenchyme | 1.19e-07 | 14 |
upper urinary tract | 1.19e-07 | 14 |
kidney rudiment | 1.19e-07 | 14 |
kidney field | 1.19e-07 | 14 |
renal system | 4.20e-07 | 19 |