FFCP PHASE1:Mm9::chr19:4498574..4498596,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=69861 | |EntrezGene=69861 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q8VC23 | |UniProt=Q8VC23 | ||
|association_with_transcript=0bp_to_ENSMUST00000048482,NM_027237,uc008gae.1_5end | |association_with_transcript=0bp_to_ENSMUST00000048482,NM_027237,uc008gae.1_5end | ||
|cluster_id=chr19:4498574..4498596,- | |||
|description=CAGE_peak_2_at_2010003K11Rik_5end | |description=CAGE_peak_2_at_2010003K11Rik_5end | ||
|id=chr19:4498574..4498596,- | |id=chr19:4498574..4498596,- | ||
|ontology_enrichment_celltype=CL:0002563!5.80e-08!9;CL:0002251!5.80e-08!9;CL:0000239!4.17e-07!6;CL:0000677!4.17e-07!6;CL:0000212!4.17e-07!6;CL:0000584!4.17e-07!6 | |ontology_enrichment_celltype=CL:0002563!5.80e-08!9;CL:0002251!5.80e-08!9;CL:0000239!4.17e-07!6;CL:0000677!4.17e-07!6;CL:0000212!4.17e-07!6;CL:0000584!4.17e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.37e-10,6;CL:0000677,4.37e-10,6;CL:0000584,4.37e-10,6;CL:0000075,1.77e-08,7;CL:0000066,5.62e-08,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.17e-14!43;UBERON:0005409!9.16e-14!59;UBERON:0000344!2.00e-13!15;UBERON:0001242!1.37e-11!13;UBERON:0000060!1.37e-11!13;UBERON:0001262!1.37e-11!13;UBERON:0004786!1.37e-11!13;UBERON:0004923!1.12e-09!24;UBERON:0004119!6.44e-09!130;UBERON:0000925!6.44e-09!130;UBERON:0006595!6.44e-09!130;UBERON:0001007!2.89e-08!128;UBERON:0001555!2.89e-08!128;UBERON:0007026!2.89e-08!128;UBERON:0003350!5.80e-08!9;UBERON:0004808!5.80e-08!9;UBERON:0001277!5.80e-08!9;UBERON:0004921!2.58e-07!126;UBERON:0004185!2.58e-07!126 | |ontology_enrichment_uberon=UBERON:0000160!2.17e-14!43;UBERON:0005409!9.16e-14!59;UBERON:0000344!2.00e-13!15;UBERON:0001242!1.37e-11!13;UBERON:0000060!1.37e-11!13;UBERON:0001262!1.37e-11!13;UBERON:0004786!1.37e-11!13;UBERON:0004923!1.12e-09!24;UBERON:0004119!6.44e-09!130;UBERON:0000925!6.44e-09!130;UBERON:0006595!6.44e-09!130;UBERON:0001007!2.89e-08!128;UBERON:0001555!2.89e-08!128;UBERON:0007026!2.89e-08!128;UBERON:0003350!5.80e-08!9;UBERON:0004808!5.80e-08!9;UBERON:0001277!5.80e-08!9;UBERON:0004921!2.58e-07!126;UBERON:0004185!2.58e-07!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.06e-27,31;UBERON:0005409,3.01e-18,47;UBERON:0000344,4.73e-14,15;UBERON:0004119,5.50e-14,118;UBERON:0000925,5.50e-14,118;UBERON:0006595,5.50e-14,118;UBERON:0001007,1.62e-13,116;UBERON:0001555,1.62e-13,116;UBERON:0007026,1.62e-13,116;UBERON:0004921,6.28e-12,114;UBERON:0001242,2.14e-11,13;UBERON:0001262,2.14e-11,13;UBERON:0004786,2.14e-11,13;UBERON:0004923,1.74e-10,24;UBERON:0009854,1.21e-09,23;UBERON:0009856,1.21e-09,23;UBERON:0002107,1.07e-08,22;UBERON:0007499,1.07e-08,22;UBERON:0006925,1.07e-08,22;UBERON:0009497,1.07e-08,22;UBERON:0000015,1.07e-08,22;UBERON:0002423,1.07e-08,22;UBERON:0006235,1.07e-08,22;UBERON:0008835,1.07e-08,22;UBERON:0003894,1.07e-08,22;UBERON:0004161,1.07e-08,22;UBERON:0008836,1.07e-08,22;UBERON:0002365,2.93e-07,25;UBERON:0002330,2.93e-07,25;UBERON:0002108,5.37e-07,4 | |||
|phase1_expression=0,50.9504095153467,59.1499011206397,71.9864822910256,65.6173406229715,15.1091344720701,12.1478573109673,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,37.758211779244,35.7878478464785,60.2943562320771,40.060865642794,36.845580789287,35.9144262772547,30.9997059604715,29.4901579171555,0,0,0,0.866554859253824,0.997407872150954,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58127163094416,9.51959867190851,3.2382191498269,6.49776417447669,9.85659151614138,2.94933282276679,0,0,0,0,0,0,0,0,0,0,12.4460428893775,0,0.742210695324124,0,0.913396434936424,0.461230994512117,0.301445281105245,0.117588707135705,0.628332956648377,43.2591193535154,0.433798070759735,0,0,0,0,13.0474232852686,0,0,36.27490183962,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47309299120532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,57.1624494561971,40.1964861328587,0,0,0.38660238396628,7.86565746031036,18.6797556829691,24.9195570207452,40.809499292828,42.3276313640708,28.6522138032307,18.502951899827,27.4899362837959,19.7740269903929,20.7492527879706,25.0918004300503,0,0,0,0,0,0.210407459670956,0.126473074248515,0.295220295959204,0.156998727841375,0.370191491765402,3.85388415213294,0,0,0,0,0,0.25462585178142,0,2.59416362840057,2.47105271869273,5.75072826109418,4.46569137202204,4.05648975048929,3.78868316920668,5.38192240565737,3.37710464954357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,18.6068371081119,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,4.02480934641258,0,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,37.018066251991,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.756037385752609,0.209088296014469,2.62035076495413,0.404593039154462,0.991841468704031,0.785267825952089,8.16574331738295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0.772758376128762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551530525350042,2.44471400581777,0.824140228955577,1.60459604795908,0.758091635291392,0.50695859978048,1.50901073108861,1.68554713445788,1.6646539625266,0.918967503289812,2.38146845641537,0.579421629724277,0.964546102318525,2.06042950401653,1.03039244094078,0.342869252385415,0.887379030796687,1.1921809497366,0.872078499793971,1.59985946706062,1.4384483341585,0.548783918618318,1.31534855718921,0.950628796921032,1.12228454331548,0.949080144993393,1.37906275325789,0.818462086339379,0.929621047115796,0.578719832943424,0,0.935726433781634,0.644613162144895,0,0,0 | |phase1_expression=0,50.9504095153467,59.1499011206397,71.9864822910256,65.6173406229715,15.1091344720701,12.1478573109673,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,37.758211779244,35.7878478464785,60.2943562320771,40.060865642794,36.845580789287,35.9144262772547,30.9997059604715,29.4901579171555,0,0,0,0.866554859253824,0.997407872150954,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58127163094416,9.51959867190851,3.2382191498269,6.49776417447669,9.85659151614138,2.94933282276679,0,0,0,0,0,0,0,0,0,0,12.4460428893775,0,0.742210695324124,0,0.913396434936424,0.461230994512117,0.301445281105245,0.117588707135705,0.628332956648377,43.2591193535154,0.433798070759735,0,0,0,0,13.0474232852686,0,0,36.27490183962,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47309299120532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,57.1624494561971,40.1964861328587,0,0,0.38660238396628,7.86565746031036,18.6797556829691,24.9195570207452,40.809499292828,42.3276313640708,28.6522138032307,18.502951899827,27.4899362837959,19.7740269903929,20.7492527879706,25.0918004300503,0,0,0,0,0,0.210407459670956,0.126473074248515,0.295220295959204,0.156998727841375,0.370191491765402,3.85388415213294,0,0,0,0,0,0.25462585178142,0,2.59416362840057,2.47105271869273,5.75072826109418,4.46569137202204,4.05648975048929,3.78868316920668,5.38192240565737,3.37710464954357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,18.6068371081119,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,4.02480934641258,0,0.16488625294148,0.161464426695906,0.0603129249281559,0,0,37.018066251991,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.756037385752609,0.209088296014469,2.62035076495413,0.404593039154462,0.991841468704031,0.785267825952089,8.16574331738295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0.772758376128762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551530525350042,2.44471400581777,0.824140228955577,1.60459604795908,0.758091635291392,0.50695859978048,1.50901073108861,1.68554713445788,1.6646539625266,0.918967503289812,2.38146845641537,0.579421629724277,0.964546102318525,2.06042950401653,1.03039244094078,0.342869252385415,0.887379030796687,1.1921809497366,0.872078499793971,1.59985946706062,1.4384483341585,0.548783918618318,1.31534855718921,0.950628796921032,1.12228454331548,0.949080144993393,1.37906275325789,0.818462086339379,0.929621047115796,0.578719832943424,0,0.935726433781634,0.644613162144895,0,0,0 | ||
|short_description=p2@2010003K11Rik | |short_description=p2@2010003K11Rik | ||
}} | }} |
Latest revision as of 20:20, 25 September 2015
Short description: | p2@2010003K11Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_2010003K11Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000048482, NM_027237, uc008gae.1_5end |
EntrezGene: | 2010003K11Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.37e-10 | 6 |
gut absorptive cell | 4.37e-10 | 6 |
enterocyte | 4.37e-10 | 6 |
columnar/cuboidal epithelial cell | 1.77e-08 | 7 |
epithelial cell | 5.62e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.06e-27 | 31 |
gastrointestinal system | 3.01e-18 | 47 |
mucosa | 4.73e-14 | 15 |
endoderm-derived structure | 5.50e-14 | 118 |
endoderm | 5.50e-14 | 118 |
presumptive endoderm | 5.50e-14 | 118 |
digestive system | 1.62e-13 | 116 |
digestive tract | 1.62e-13 | 116 |
primitive gut | 1.62e-13 | 116 |
subdivision of digestive tract | 6.28e-12 | 114 |
intestinal mucosa | 2.14e-11 | 13 |
wall of intestine | 2.14e-11 | 13 |
gastrointestinal system mucosa | 2.14e-11 | 13 |
organ component layer | 1.74e-10 | 24 |
digestive tract diverticulum | 1.21e-09 | 23 |
sac | 1.21e-09 | 23 |
liver | 1.07e-08 | 22 |
epithelial sac | 1.07e-08 | 22 |
digestive gland | 1.07e-08 | 22 |
epithelium of foregut-midgut junction | 1.07e-08 | 22 |
anatomical boundary | 1.07e-08 | 22 |
hepatobiliary system | 1.07e-08 | 22 |
foregut-midgut junction | 1.07e-08 | 22 |
hepatic diverticulum | 1.07e-08 | 22 |
liver primordium | 1.07e-08 | 22 |
septum transversum | 1.07e-08 | 22 |
liver bud | 1.07e-08 | 22 |
exocrine gland | 2.93e-07 | 25 |
exocrine system | 2.93e-07 | 25 |
small intestine | 5.37e-07 | 4 |