FFCP PHASE1:Mm9::chr8:86590801..86590818,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=19724|HGNC=|MCL_coexpression_id=0|UniProt=P48377,Q3V383|association_with_transcript=66bp_to_ENSMUST00000005600,NM_009055,uc009mlt.2,uc009mlu.2,uc009mlv.2_5end|description=CAGE_peak_2_at_Rfx1_5end|id=chr8:86590801..86590818,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002453,4.50e-21,8;CL:0000333,7.07e-17,10;CL:0000095,7.07e-17,10;CL:0000243,7.07e-17,10;CL:0000123,7.07e-17,10;CL:0000125,7.07e-17,10;CL:0000030,7.07e-17,10;CL:0000339,7.07e-17,10;CL:0000878,7.66e-15,2;CL:0000129,7.66e-15,2;CL:0002605,2.29e-14,2;CL:0002604,2.29e-14,2;CL:0000128,1.50e-10,6;CL:0000126,1.50e-10,6;CL:0000127,1.50e-10,6;CL:0002194,7.14e-08,4;CL:0000766,7.14e-08,4;CL:0000234,7.14e-08,4;CL:0000576,7.14e-08,4;CL:0000235,7.14e-08,4;CL:0000864,7.14e-08,4;CL:0002009,7.14e-08,4;CL:0000040,7.14e-08,4;CL:0000559,7.14e-08,4|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.320297694209588,0,0.454999239389536,0,0,0.16787927191189,0,0.129123323441576,0,0.234064526321993,0,0,0,0.0874204024189974,0,0,0,0,0.274228867211478,0,4.84746753861098,0,0,0,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0.251793635951155,0,0,0.782391344348039,0.436050312760893,1.31811709640683,1.36100929351998,1.1198913730029,0,0.503347818173209,0,0,0,0,0,0.202316460859598,0,0,0,0,0.449949858640699,0,0.7104801149461,1.49800055259202,5.37905627450176,0.414758449233911,0,0,0.285650984403804,0.441737081903227,0.244981598429908,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0.263772575460388,0.457438218012048,0.52091337055676,0,0,0,0,0.284743361598206,0.186399445825301,0,0.0755715601067855,0.869593466105033,0,0,0,0,0,0.983110940922263,0.170430322578058,0.259786004602869,0,0.281686839553361,0,2.54805239706646,0,0,0,0,0.91347103775248,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0.292780797011547,0.209446706813455,0,0.838705871541442,0,0,0,0,0.628271760564322,0,0.255715457330331,0.41557608911912,0,0.305518091550949,0.248813941220186,0.252722758433675,0.210441855886474,0.130120442962704,0.229902104433473,0.180062129805349,0.150704817835715,0.544291993210623,0.2562274405697,0.187403449119458,0.258703370739016,0.431135985865684,0,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0.284163499395593,0,0.234526059981096,0,0,0,0,0.232533944750408,0,0.350296027101508,0.16455984991348,0.164167464079095,0.243206428637567,0,0,0.134206418760372,0.630869845692382,0.823236899034275,0,0.264450566663544,0,0,0.257734922644187,0,0,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0,0,0,0,0.280543279561274,0.126473074248515,0,0,0.246794327843601,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0.923765950833023,0,0.162964976442026,0.339490171550376,0.704070744865506,0,0.714130922658041,0.195133647857799,0.472905432318573,0.44292937929755,0.159454768657487,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,0,0.234423373184406,0,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0,0,0,0,0.321321316421807,0,0,0.488660878060728,0.494910368917606,0,0,0,0,0.590603785761546,0.614870295887855,0,0,0.356497378384721,0,0,1.03135543248187,0.680879211507576,0.18006109403131,0.258717367565509,0,0.354680467284547,0.891844088010353,1.15184314421485,0.913394847343798,0.23467170806371,0.21183207086382,0,0.16488625294148,0.161464426695906,0.241251699712623,0.119372344003136,0.164140899745061,0.291480836629851,0.556275906031529,0.170870880797853,0,0,0,0,0,0.169978429993855,0.279902904647316,0.414599921413271,0.954670618015114,0.158167996790568,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0.621339313086926,64.2609950099977,0,0,0.388902376688095,0.904118764344118,0.168956125490778,0.117357238645754,0.39061315453185,0.838874755405687,1.93267296660805,19.298010419277,0,0,0.102710957164827,0,0,0.198681354781265,0.240390899039938,0.295379054349154,0,0.15241361331,0.302478555410522,0,0.192423683280659,0,0.226730383615211,0,0,0.167884616364078,0.19318959403219,0,0,0.214368379079066,0,0.564751842617067,0,1.14579102687879,0.171853182343688,0,0,0,0,0,0,0,0.399024873401031,0,0.486213434136588,0,0.183843508450014,0,0.206035057238894,0,0,0,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0.476293691283074,0.115884325944855,0,0,0.294397840268795,0,0.70990322463735,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0.263069711437843,0.407412341537585,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0.385813221962283,0,0,0.214871054048298,0.191288332068843,0,0|short_description=p2@Rfx1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19724 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=P48377,Q3V383 | |||
|association_with_transcript=66bp_to_ENSMUST00000005600,NM_009055,uc009mlt.2,uc009mlu.2,uc009mlv.2_5end | |||
|cluster_id=chr8:86590801..86590818,+ | |||
|description=CAGE_peak_2_at_Rfx1_5end | |||
|id=chr8:86590801..86590818,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,4.50e-21,8;CL:0000333,7.07e-17,10;CL:0000095,7.07e-17,10;CL:0000243,7.07e-17,10;CL:0000123,7.07e-17,10;CL:0000125,7.07e-17,10;CL:0000030,7.07e-17,10;CL:0000339,7.07e-17,10;CL:0000878,7.66e-15,2;CL:0000129,7.66e-15,2;CL:0002605,2.29e-14,2;CL:0002604,2.29e-14,2;CL:0000128,1.50e-10,6;CL:0000126,1.50e-10,6;CL:0000127,1.50e-10,6;CL:0002194,7.14e-08,4;CL:0000766,7.14e-08,4;CL:0000234,7.14e-08,4;CL:0000576,7.14e-08,4;CL:0000235,7.14e-08,4;CL:0000864,7.14e-08,4;CL:0002009,7.14e-08,4;CL:0000040,7.14e-08,4;CL:0000559,7.14e-08,4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.320297694209588,0,0.454999239389536,0,0,0.16787927191189,0,0.129123323441576,0,0.234064526321993,0,0,0,0.0874204024189974,0,0,0,0,0.274228867211478,0,4.84746753861098,0,0,0,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0.251793635951155,0,0,0.782391344348039,0.436050312760893,1.31811709640683,1.36100929351998,1.1198913730029,0,0.503347818173209,0,0,0,0,0,0.202316460859598,0,0,0,0,0.449949858640699,0,0.7104801149461,1.49800055259202,5.37905627450176,0.414758449233911,0,0,0.285650984403804,0.441737081903227,0.244981598429908,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0.263772575460388,0.457438218012048,0.52091337055676,0,0,0,0,0.284743361598206,0.186399445825301,0,0.0755715601067855,0.869593466105033,0,0,0,0,0,0.983110940922263,0.170430322578058,0.259786004602869,0,0.281686839553361,0,2.54805239706646,0,0,0,0,0.91347103775248,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0.292780797011547,0.209446706813455,0,0.838705871541442,0,0,0,0,0.628271760564322,0,0.255715457330331,0.41557608911912,0,0.305518091550949,0.248813941220186,0.252722758433675,0.210441855886474,0.130120442962704,0.229902104433473,0.180062129805349,0.150704817835715,0.544291993210623,0.2562274405697,0.187403449119458,0.258703370739016,0.431135985865684,0,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0.284163499395593,0,0.234526059981096,0,0,0,0,0.232533944750408,0,0.350296027101508,0.16455984991348,0.164167464079095,0.243206428637567,0,0,0.134206418760372,0.630869845692382,0.823236899034275,0,0.264450566663544,0,0,0.257734922644187,0,0,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0,0,0,0,0.280543279561274,0.126473074248515,0,0,0.246794327843601,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0.923765950833023,0,0.162964976442026,0.339490171550376,0.704070744865506,0,0.714130922658041,0.195133647857799,0.472905432318573,0.44292937929755,0.159454768657487,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0,0,0,0.234423373184406,0,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0,0,0,0,0.321321316421807,0,0,0.488660878060728,0.494910368917606,0,0,0,0,0.590603785761546,0.614870295887855,0,0,0.356497378384721,0,0,1.03135543248187,0.680879211507576,0.18006109403131,0.258717367565509,0,0.354680467284547,0.891844088010353,1.15184314421485,0.913394847343798,0.23467170806371,0.21183207086382,0,0.16488625294148,0.161464426695906,0.241251699712623,0.119372344003136,0.164140899745061,0.291480836629851,0.556275906031529,0.170870880797853,0,0,0,0,0,0.169978429993855,0.279902904647316,0.414599921413271,0.954670618015114,0.158167996790568,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0.621339313086926,64.2609950099977,0,0,0.388902376688095,0.904118764344118,0.168956125490778,0.117357238645754,0.39061315453185,0.838874755405687,1.93267296660805,19.298010419277,0,0,0.102710957164827,0,0,0.198681354781265,0.240390899039938,0.295379054349154,0,0.15241361331,0.302478555410522,0,0.192423683280659,0,0.226730383615211,0,0,0.167884616364078,0.19318959403219,0,0,0.214368379079066,0,0.564751842617067,0,1.14579102687879,0.171853182343688,0,0,0,0,0,0,0,0.399024873401031,0,0.486213434136588,0,0.183843508450014,0,0.206035057238894,0,0,0,0,0.187283014939765,0.0640251524048693,0.0574354689556133,0.476293691283074,0.115884325944855,0,0,0.294397840268795,0,0.70990322463735,0.238436189947321,0.145346416632329,0,0.0846146078916765,0,0.263069711437843,0.407412341537585,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0.385813221962283,0,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p2@Rfx1 | |||
}} |
Latest revision as of 21:03, 25 September 2015
Short description: | p2@Rfx1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rfx1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 66bp_to_ENSMUST00000005600, NM_009055, uc009mlt.2, uc009mlu.2, uc009mlv.2_5end |
EntrezGene: | Rfx1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 4.50e-21 | 8 |
migratory neural crest cell | 7.07e-17 | 10 |
neuron associated cell | 7.07e-17 | 10 |
glial cell (sensu Vertebrata) | 7.07e-17 | 10 |
neuron associated cell (sensu Vertebrata) | 7.07e-17 | 10 |
glial cell | 7.07e-17 | 10 |
glioblast | 7.07e-17 | 10 |
glioblast (sensu Vertebrata) | 7.07e-17 | 10 |
central nervous system macrophage | 7.66e-15 | 2 |
microglial cell | 7.66e-15 | 2 |
astrocyte of the cerebral cortex | 2.29e-14 | 2 |
astrocyte of the hippocampus | 2.29e-14 | 2 |
oligodendrocyte | 1.50e-10 | 6 |
macroglial cell | 1.50e-10 | 6 |
astrocyte | 1.50e-10 | 6 |
monopoietic cell | 7.14e-08 | 4 |
myeloid leukocyte | 7.14e-08 | 4 |
phagocyte | 7.14e-08 | 4 |
monocyte | 7.14e-08 | 4 |
macrophage | 7.14e-08 | 4 |
tissue-resident macrophage | 7.14e-08 | 4 |
macrophage dendritic cell progenitor | 7.14e-08 | 4 |
monoblast | 7.14e-08 | 4 |
promonocyte | 7.14e-08 | 4 |