FFCP PHASE1:Mm9::chr11:87392000..87392002,+: Difference between revisions
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|id=chr11:87392000..87392002,+
|short_description=p9@Sept4
|description=CAGE_peak_9_at_Sept4_5end
|association_with_transcript=14bp_to_ENSMUST00000135175_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=18952 | |EntrezGene=18952 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=14bp_to_ENSMUST00000135175_5end | |||
|cluster_id=chr11:87392000..87392002,+ | |||
|description=CAGE_peak_9_at_Sept4_5end | |||
|id=chr11:87392000..87392002,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,3.18e-07,3;CL:0002614,5.46e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!8.08e-13!12;UBERON:0003057!8.08e-13!12;UBERON:0002298!2.62e-11!6;UBERON:0001049!2.09e-09!52;UBERON:0005068!2.09e-09!52;UBERON:0006241!2.09e-09!52;UBERON:0007135!2.09e-09!52;UBERON:0000955!4.51e-08!50;UBERON:0006238!4.51e-08!50;UBERON:0002950!6.90e-08!4;UBERON:0001891!6.90e-08!4;UBERON:0009616!6.90e-08!4;UBERON:0001017!1.20e-07!73;UBERON:0005743!1.20e-07!73;UBERON:0004733!1.49e-07!6;UBERON:0004732!1.49e-07!6;UBERON:0002028!1.49e-07!6;UBERON:0007277!1.49e-07!6;UBERON:0000025!1.58e-07!114;UBERON:0002346!1.86e-07!71;UBERON:0003075!1.86e-07!71;UBERON:0007284!1.86e-07!71;UBERON:0000073!2.81e-07!75;UBERON:0001016!2.81e-07!75;UBERON:0002616!3.18e-07!49;UBERON:0002240!8.58e-07!6;UBERON:0005174!8.58e-07!6;UBERON:0001137!8.58e-07!6;UBERON:0000033!8.91e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,1.42e-35,2;UBERON:0002298,1.42e-35,2;UBERON:0005290,1.42e-35,2;UBERON:0010096,1.42e-35,2;UBERON:0003076,7.25e-14,12;UBERON:0003057,7.25e-14,12;UBERON:0004733,1.24e-12,6;UBERON:0004732,1.24e-12,6;UBERON:0002028,1.24e-12,6;UBERON:0007277,1.24e-12,6;UBERON:0004684,3.18e-07,3;UBERON:0002275,3.18e-07,3;UBERON:0002038,5.46e-07,3;UBERON:0009663,5.46e-07,3;UBERON:0009661,5.46e-07,3;UBERON:0000125,5.46e-07,3;UBERON:0002308,5.46e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0,0,0,0,0,0,0,0,0,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,1.65993539510744,0.307213066512487,0,0,0,0.837548997004143,0.56276261003168,1.06958773443767,0,0.427115042397309,0.186399445825301,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0.585561594023094,0.628340120440365,0,0,0,0,0.449371918214468,0,0,0.173824320192276,0.255715457330331,0.41557608911912,0.324482526135515,0,0,0,0,0,0,0,0.150704817835715,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0,0,0.140271639780637,0.126473074248515,0.147610147979602,0.156998727841375,0.246794327843601,0,0,0,0,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0.195133647857799,0.315270288212382,0.664394068946325,0.318909537314974,0,0.172684981865896,0.289298117163023,0,0,0,0,1.12385412991454,1.40654023910644,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0,0,0,0.63549621259146,0,0,0,0,0,0,0,1.29797711407357,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429742108096597,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0,0,0,0,0,0,0,0,0,0,0,0,0.677689064138264,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,1.65993539510744,0.307213066512487,0,0,0,0.837548997004143,0.56276261003168,1.06958773443767,0,0.427115042397309,0.186399445825301,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0.585561594023094,0.628340120440365,0,0,0,0,0.449371918214468,0,0,0.173824320192276,0.255715457330331,0.41557608911912,0.324482526135515,0,0,0,0,0,0,0,0.150704817835715,0.136072998302656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0,0,0.140271639780637,0.126473074248515,0.147610147979602,0.156998727841375,0.246794327843601,0,0,0,0,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0.195133647857799,0.315270288212382,0.664394068946325,0.318909537314974,0,0.172684981865896,0.289298117163023,0,0,0,0,1.12385412991454,1.40654023910644,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0,0,0,0.63549621259146,0,0,0,0,0,0,0,1.29797711407357,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429742108096597,0,0.220591419119515,0 | ||
|short_description=p9@Sept4 | |||
}} | }} |
Latest revision as of 22:05, 25 September 2015
Short description: | p9@Sept4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Sept4_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 14bp_to_ENSMUST00000135175_5end |
EntrezGene: | Sept4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 3.18e-07 | 3 |
neuron of the substantia nigra | 5.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 1.42e-35 | 2 |
brainstem | 1.42e-35 | 2 |
myelencephalon | 1.42e-35 | 2 |
future myelencephalon | 1.42e-35 | 2 |
posterior neural tube | 7.25e-14 | 12 |
chordal neural plate | 7.25e-14 | 12 |
segmental subdivision of hindbrain | 1.24e-12 | 6 |
segmental subdivision of nervous system | 1.24e-12 | 6 |
hindbrain | 1.24e-12 | 6 |
presumptive hindbrain | 1.24e-12 | 6 |
raphe nuclei | 3.18e-07 | 3 |
reticular formation | 3.18e-07 | 3 |
substantia nigra | 5.46e-07 | 3 |
telencephalic nucleus | 5.46e-07 | 3 |
midbrain nucleus | 5.46e-07 | 3 |
neural nucleus | 5.46e-07 | 3 |
nucleus of brain | 5.46e-07 | 3 |